| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_1459 |
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| Symbol | |
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| ID | 8225030 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | - |
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| Start bp | 1732345 |
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| End bp | 1734123 |
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| Gene Length | 1779 bp |
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| Protein Length | 592 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 644929318 |
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| Product | RagB/SusD domain protein |
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| Protein accession | YP_003085870 |
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| Protein GI | 255035249 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 0.983922 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.298849 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGACAT TTAGATTTTC AAAAATAGCG CTGGTCGCAA TTTTCGGTCT GATTTCATAT
TCCTGCCAAG AGAGTTTCCT CGATAAACCC GCACTAGGGT CGCTGAGCGA TGCCCAGCTG
AGCACCAAAG CCGGTGTGCA AAGCCTGCTG ATCGGCGCAT ATGCGGCGCT CGATGGGAAC
GGGGTAGGTG CTGCCAGCGC CTGGGATGCC GCCGCCGACA ACTGGATTTA CGGCAGCATT
GCCGGCGGAG ACGCCAAAAA AGGCAGCGAC GGCGCCGACC AGCCGGGGAT CAACTCCATC
ATGATTTACA GCGCCGGTCC GAGCAATGGG TTTTTCAACA GCAAATGGCG CGCTGCCTAC
GAGGGCATCA ACCGGGCCAA TAGCGTGCTG CGGTTCATTC CGCTCGTCAC TTCGGGAATC
ACCGATGCCG AAAAGACCGA TTACACGGCT CAGGCACGCT TCCTGCGCGG GCATTACTAT
TCGGAATTGA AAAAAATGTT CAACATGGTG CCCTGGGTGG ACGAGAATAC ACCCGACCCG
GCAGCCGTGA AAAACGATGC GGACATCTGG CCGAAAATTG AAGAGGATTT CCGGTTTGCG
ATGGATAACC TTCCGGCAAC ACAGTCGGAA GTGGGCCGTG CCAACAAATG GGCGGCTGCG
GCTTACCTTG CGAAAACTTA TCTGTACGAG AAGAAATTTG CCGATGCCAA AACGATTTTC
GACCAGGTGA TCACGCAGGG TGTAACGAGC AATGGCCTGA AATACGACCT GCTGCCGAAA
TACCAGGACA ACTTCGATGC GGCGCAAAAG AACCTCGCGG AGTCGGTTTT CGCGATCCAG
ATGGCGGCTA ACGATGGTAC CAACACCATC GACAATGCCA ATACCGGCGG CATGCTCAAC
TTCCCGTACA ACTCGCCGTT CCGCTGCTGC GGGTTCTACC AGCCGAGCCT CGACCTGGCC
AATTCGTTCC AGACCGACGC CAATGGTTTG CCCAAAGTGG ACAACTACAA TGCGACAACC
CTGAAAAACG ATATGGGTGT CAAATCCGAC GCCGCATTCG CGCCGGACGT CACCACCGCG
CTCGATCCGC GGATCGACTG GACGGTAGGC CGCCGCGGTA TCCCGTTCCT CGATTGGGGA
AATCACCCGG GGCAGTCATG GATCCGCGAC CAGAGCTACG CAGGACCTTA TTCGCCTAAA
AAGAATATTT ACTGGCAGGC AACGCAGGAT AAGTATTCCG ATCAGCATTC ATGGGCTCCG
GGAACGGCGA TCAATATTCA GGTAATCCGG TTTGCGGACG TGCTCCTGAT GGCAGCGGAA
GCGGAAGCGC AGCTGAACAA CCTCGCCAAA GCGCAGGAAT ATGTAAACCG CGTCCGCGCC
CGCGCCGCGA AACCCGAAAG CTGGGTGTAC ACTTACGCCG ATCCTTCGAA ACCAATGGCT
GGATTCACCA AAACGCCGGC TGCGAATTAC AAAGTCGCGC AATATCCGGC AGGTGCATTT
GCGGCAAAAG GAAAAGACGG ATCGCTTGCA GCCATCTATT TCGAGCGTAA GCTGGAACTG
GCGATGGAAG GTCACCGTTT CTTCGACCTG TCGCGCTGGG GTATCGCCGA GCAGACGCTC
AATTCCTACA TTGCATTTGA AGGGAAAATC ACCCCTGACG TGCGGGGCGG CAAGTTCCTG
AAAAATGTGA ATGAGTACTT CCCGATCCCG CAACGGCAGA TCGACCTTAG TACTAAAAAT
GGCGTATCGT CATTGAAGCA AAATCCGGGT TATCAATAA
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| Protein sequence | MKTFRFSKIA LVAIFGLISY SCQESFLDKP ALGSLSDAQL STKAGVQSLL IGAYAALDGN
GVGAASAWDA AADNWIYGSI AGGDAKKGSD GADQPGINSI MIYSAGPSNG FFNSKWRAAY
EGINRANSVL RFIPLVTSGI TDAEKTDYTA QARFLRGHYY SELKKMFNMV PWVDENTPDP
AAVKNDADIW PKIEEDFRFA MDNLPATQSE VGRANKWAAA AYLAKTYLYE KKFADAKTIF
DQVITQGVTS NGLKYDLLPK YQDNFDAAQK NLAESVFAIQ MAANDGTNTI DNANTGGMLN
FPYNSPFRCC GFYQPSLDLA NSFQTDANGL PKVDNYNATT LKNDMGVKSD AAFAPDVTTA
LDPRIDWTVG RRGIPFLDWG NHPGQSWIRD QSYAGPYSPK KNIYWQATQD KYSDQHSWAP
GTAINIQVIR FADVLLMAAE AEAQLNNLAK AQEYVNRVRA RAAKPESWVY TYADPSKPMA
GFTKTPAANY KVAQYPAGAF AAKGKDGSLA AIYFERKLEL AMEGHRFFDL SRWGIAEQTL
NSYIAFEGKI TPDVRGGKFL KNVNEYFPIP QRQIDLSTKN GVSSLKQNPG YQ
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