| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_1453 |
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| Symbol | |
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| ID | 8225024 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | + |
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| Start bp | 1722791 |
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| End bp | 1725187 |
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| Gene Length | 2397 bp |
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| Protein Length | 798 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 644929312 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_003085864 |
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| Protein GI | 255035243 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.545362 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.722557 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCAAGCA GCTTATTTAC ACGTTTATTC CTCCTGATTT CAATCAGTTT TATTGGGTTA
CAAGGGTTTG CCCAGAAAGT CCCTTCTGTT ACCGGTTATG TGAAGACGGA ATCGGGCGAG
GCGTTGCCCG GGGCGACGGT TTCCCTGCTT AAAACACCAC ACGGCGTTAC TACCGATGCG
AACGGCTTTT TCACGTTACC GAACGTTAAA GCGGGCAGTT ATACGATCCA GGCCACGCTC
ATGGGCTATA AGGCGATGTC CGAAACGGTT AGCATCCAGG CTGGAAAAAC GGCCTCTCTG
AGCTTTCAAC TCAAAGAAAA CCAGCAGAAT CTCAGCGAAG TGAGCGTTTA CGGGAAAACG
GAAACGCAGG TGGTGAAGGA GCAGGCATTT ACCGTGAATG CCATTGAAAC AAAACAATTC
CAGAACACCA CCGCCGATTT GAACCAGGTG CTCAACCGCA GTGCGGGTGT GCGCATCCGT
GAGCAGGGCG GGCTGGGTTC GAACTTCAAT TTTTCGATCA ACGGGCTGTC GGGCAAGGCG
GTGAAGTACT TTATCGACGG CGTGCCTATG GAAGTAATGG GCAGCGCGAT GTCGCTGAAC
AACATCCCGG TAAACCTTTC GGAGCGGATT GAAGTGTACA AAGGCGTGGT GCCGGTGCAG
CTGGGTTCTG ATGCGATGGG CGGCGCCGTG AATGTGATCA CAAACCAGAA GCAGACCAAT
TATCTCGACC TCAGCCACAG CTACGGCTCG TTTAACACCC ACCGTTCGGC GGTGACGGCC
CAGTATGTGC ACAAGCCAAC GGGCATTACC GTGAAAGCGA GCGGCTTTTT CAATTATTCC
GACAACAATT ATAAAATGAA GGGCGTCGAG ATCCTGGAAG GCGGCACGCG GGTCGGCAAC
CAGATCACCG ATCTCAATGG CGCCAACTTC GTGACAACCA ACGTGAAGCG CTTCCACGAT
CACTACCGCT CCGGAATGGG CCAGGTGGAG GTGGGTATTT CCAACAAAAG CTGGGCCGAC
GTGCTGTATG CCGGATTTGG CTATTCGGAA ACGCGACAGG ACCAGCAAAC GGGTTTCGAG
CAAGCGATCG TGTATGGCAA TGTGGACCGG AAAGGAAAGT CGTCGACAGC GACATTGCGT
TACAAGAAAA GCAATTTGCT CGTTAGCGGA CTGGATGTGA ATGTGTTCGC ATCGCTTTCC
AAAGACAAAT TCCTGACCGC CGACACGCTG CTGCGCCAAT ATTACTGGGA TGGTTCGTGG
ACGGTTAAGG GCGCAACGGA AATGGGCGGG GTTAAATCGC TTTCGCACAT CAACCGCCCG
CGCTCGTTTA TGCGGGCAAA TGCGAGCTAC ACGCTCAGCG ATCAGCATTC ATTTAATATC
AACTACACTT TCGACCGCCT CAAAAACGAG AACTACAATG AGCTGCTCGT CTCCGGCGAC
GATATGCCGG GCATTATGAC GAAGCAAATC CTCGGCCTGG CCTACCAGCA GGAGCTGCTC
AACAAGCGCT GGACGAATAC GTTTTTTATC AAATACTACG GCCTGGGGCT TGAACGGAAG
AAATGGATCG ACAATAGTTA CCAGACGCTG AACGACAAAT TCCCGAACTA CGGCTACGGC
GCGGCGTCGC GCTACAAGAT CCTCCCCGAC CTTGGCATAA AGCTGTCCCT TGAACACACG
TTTCGCTTGC AGGAAGTGGA AGAAGTTTTC GGCGACGGCC TGAACCTGCA ACCGAATCCC
GATCTCAAAC CCGAGCGCAG CGACAATGTG AACCTGGGCT CCTACTACGG CTTCCGCACC
GGCAAACACC GGTTTTTTGC AGAAGCGGCG GGATTTTACC GCAATGCCTC GGACTTCATT
TACCCCGTGG CCGACCAGCG TTCGAAGGCT TTGAAGAATG AAAATAAATC CAATGTGCGC
GTGACCGGCT TCGAAGCCGA ACTCCGGTAC GACTACGCGG ACCTGCTGTC GTTCAATGTG
AATGCGACCT ATCAGAGTGC CGTCAACATG ACCAAATTCG GCAGCACGAC TTCCAATTTG
CCCGAAGCGA CCTACAAGAA CAAGATCCCT AACCAGCCGT GGTTCTTCGG CAATGCCAAC
TTCGGCATCG GGAAAAGTGA TGTATTTACA AAAGGTTCGC GCCTGCAATT CAGCTGGTTT
ACGCAATATG TGCATTGGTT TTACCTGACC TGGGAGGCAT TCGGCAATGT AAATGGCAAA
TCCACCATCC CGAGCCAGCT GATCCACAAC GCAACGCTGA GCTACTCATT CCGCGATGGC
CGCTACAATG TCTCCGCGGA ATGCCGCAAC CTCACCGATG ACCTTGCCTA CGACAATTTC
AGGCTCCAAA AACCCGGTCG CGCTTTTGCA TTGAAACTCA GGTATTTTAT TCAGTAA
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| Protein sequence | MPSSLFTRLF LLISISFIGL QGFAQKVPSV TGYVKTESGE ALPGATVSLL KTPHGVTTDA
NGFFTLPNVK AGSYTIQATL MGYKAMSETV SIQAGKTASL SFQLKENQQN LSEVSVYGKT
ETQVVKEQAF TVNAIETKQF QNTTADLNQV LNRSAGVRIR EQGGLGSNFN FSINGLSGKA
VKYFIDGVPM EVMGSAMSLN NIPVNLSERI EVYKGVVPVQ LGSDAMGGAV NVITNQKQTN
YLDLSHSYGS FNTHRSAVTA QYVHKPTGIT VKASGFFNYS DNNYKMKGVE ILEGGTRVGN
QITDLNGANF VTTNVKRFHD HYRSGMGQVE VGISNKSWAD VLYAGFGYSE TRQDQQTGFE
QAIVYGNVDR KGKSSTATLR YKKSNLLVSG LDVNVFASLS KDKFLTADTL LRQYYWDGSW
TVKGATEMGG VKSLSHINRP RSFMRANASY TLSDQHSFNI NYTFDRLKNE NYNELLVSGD
DMPGIMTKQI LGLAYQQELL NKRWTNTFFI KYYGLGLERK KWIDNSYQTL NDKFPNYGYG
AASRYKILPD LGIKLSLEHT FRLQEVEEVF GDGLNLQPNP DLKPERSDNV NLGSYYGFRT
GKHRFFAEAA GFYRNASDFI YPVADQRSKA LKNENKSNVR VTGFEAELRY DYADLLSFNV
NATYQSAVNM TKFGSTTSNL PEATYKNKIP NQPWFFGNAN FGIGKSDVFT KGSRLQFSWF
TQYVHWFYLT WEAFGNVNGK STIPSQLIHN ATLSYSFRDG RYNVSAECRN LTDDLAYDNF
RLQKPGRAFA LKLRYFIQ
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