| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_1450 |
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| Symbol | |
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| ID | 8225021 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | - |
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| Start bp | 1717696 |
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| End bp | 1720065 |
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| Gene Length | 2370 bp |
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| Protein Length | 789 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 644929309 |
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| Product | protein of unknown function DUF214 |
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| Protein accession | YP_003085861 |
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| Protein GI | 255035240 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0577] ABC-type antimicrobial peptide transport system, permease component |
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| TIGRFAM ID | [TIGR03434] Acidobacterial duplicated orphan permease |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.264856 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.706049 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATTCAGA ATTACTTCAA AATCGCATTT CGTAACCTGC TCAAAAGCAA AACATTTTCT
GCCATTAATG TCCTCGGGCT TGCGCTCGGG ATGGCGTGCA GCCTCATGAT CCTGCTCTGG
ATCCGCGACG AACGCGCCGT GGATTCGTTT CATGCCAACA AGGACCAGCT GTACCGGATT
TACATGCGCG AACATTTCAG CGGGAAGGTG CAGGGCGTGA TCTGGACGCC CGGGCCGCTG
GCCGAAGAGC TGAAAAAGTC GGTTCCCGAG ATCGAAATGA GCACGCCGTT TTCCTGGACC
ATTCAGCAGA CCTTTTCTGT TGGTAATAAA ATTCACAAGC AGGCGACCAA CTGGGGGGGC
GCGGATTTCT TTAAAATGTT CAGCTACAAG CTCTTGCAGG GAACTCCTGA GGGGGCATTA
CGCGACAAGA GCAACATCGT GATTTCGCGT AATATGGCCG AAGCGTTTTT CGGAACTCCC
GAGGCTGCCA TAGGGAAGGC GATCCGCTAC GACAACCGCA AGGAAATGAC CGTTTCGGGC
GTTTTCGAAA ATATAGGAAC CAACAGTTCC CTGCAATTCG ATTGCCTCAT GACCTGGGAT
GCCTATGTGG ACGACAACAA CTGGGCCACG CACTGGAGTA ATACCGATCC GGTAACCTTT
TTTAAACTCC GGAAAGATGC CGATCCCGCC AAGGTGGAAG CCAAAATGCT CCACCTGCTC
GACAAAACAA ACCGCGACGG CGATAAGCCC TACAAGACGC AGCTGGCCAT GCAGCCTTTC
CATGAATATT ACCTGAACAG CAATATCAAA GACGCCAAAA TGGACGGCGG GCGCATTGAG
TATGTGCGGC TTTTTAGCTT TGTAGCCGTG TTTATCCTGC TTATTGCCTG CATTAATTTT
ATGAACCTCG CTACGGCACG ATCGTCGCGG CGGGCGAAGG AAGTGGGCGT GAGGAAGGTG
GTAGGCGCCA TGCGCTCGAT GCTGGCCGGA CAGTTTATGG GCGAGGCATT GCTGATTGCG
ACACTATCTG CGGTCATGGC CGTGTTGCTG GTGACGCTGC TCTTGCCCGC ATTCAACAAC
CTCACAGGCA AGCAGATGGC GTTGCCTTTT TCGGAGCCGG TGTTCTGGGC GGTGATCGGC
GGGCTGCTTG TGTTAACGGG CCTGCTGGCG GGGAGTTACC CTGCATTTTT CCTATCGTCG
CTCAATCCGG TGCGCATTCT CAAAGGTGCC CTGAAATTCG ATTCCAGCTC GGTATGGGTG
CGGCAGGGGC TGGTGGTGTT CCAGTTCGGG CTGTCGGTGA TCCTCATCGT GGGTATGATC
ATTATTTACC GGCAGGTAGG TTTTGTACAA AATAAAAACC TTGGTTTCGA CCGTGAGAAC
CTCGTCTATT TTCCCATTGA AGGCGACCTT TTCTCCAAAT TCGACCTGTT AAAAGAACAA
CTCACGCAGG TTACAGGCAT CAAACAGGTC ACCCACATGA CCGCCAATCC CGCGTCCAAC
GGCAACGGCA CCGACGGCAT TACCTGGCCG GGCAGCAACC CGACCGAACA GGTCCGGTTC
ACGCCCGTGG GTGTTGGTTA TGATTTTACC AAAACCATGA ACCTGAAAAT GGCCGACGGT
CGCGATTTTT CGAAGGATTT CCCGACGGAT TCGAGCGGCG TGCTCGTCAA CCAGACGGCT
GTGAAAGTAA TGGGCCTCAA AAATCCCGTT GGCCGGGAAA TAAATTGGGG CCAGTCGAAA
GTCCGCATTG TGGGCGTTTT GAAAGATTTT CACTTCGAGT CGCTGCACAA GGCCATTCGT
CCGCTGATTG CCTACCTGGG CGCACGCCAG CCGCAGGGCA GCGTGGTGAT CCGCATTCAG
GCGGGTAAAA CGCCCGAAAC ACTGGCGGCC ATCGAGCAGA TATGCAAGAA ATTTAATCCT
AACGTACCGT TTACTTATGC ATTTACCGAT CAGGAATATG CGCGGCAATA CCAAAGTGAG
CAGATCGTCG GCAAGCTGGC GGGGTATTTC GCATTCCTGG CAATATTCAT TTCCTGCCTC
GGGCTATTCG GCTTGGCGGC ATTCACCGCC GAGCAGCGTA CCAAGGAAAT CGGCGTGCGT
AAGGTGTTGG GTGCCTCGGT AGCGGGCATT GTGGGGCTGC TTTCCAAAGA TTTTCTGAAA
CTCGTCGTCA TGGCCATCGT GCTGGCATCT CCGGTAGCCT GGTACATTAT GAAGCATTGG
CTGCAAGGCT TTGCTTATCA GATCAATATC GAATGGTGGA TGTTCGCCCT GGCTGGCATT
ATCGCCGTGC TGATCGCCGT GTTTACTATC AGTTTTCAAT CGGTAAGGGC GGCCATGGTG
AATCCGGTGA GGAGTTTGAA GAGTGAGTAG
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| Protein sequence | MIQNYFKIAF RNLLKSKTFS AINVLGLALG MACSLMILLW IRDERAVDSF HANKDQLYRI
YMREHFSGKV QGVIWTPGPL AEELKKSVPE IEMSTPFSWT IQQTFSVGNK IHKQATNWGG
ADFFKMFSYK LLQGTPEGAL RDKSNIVISR NMAEAFFGTP EAAIGKAIRY DNRKEMTVSG
VFENIGTNSS LQFDCLMTWD AYVDDNNWAT HWSNTDPVTF FKLRKDADPA KVEAKMLHLL
DKTNRDGDKP YKTQLAMQPF HEYYLNSNIK DAKMDGGRIE YVRLFSFVAV FILLIACINF
MNLATARSSR RAKEVGVRKV VGAMRSMLAG QFMGEALLIA TLSAVMAVLL VTLLLPAFNN
LTGKQMALPF SEPVFWAVIG GLLVLTGLLA GSYPAFFLSS LNPVRILKGA LKFDSSSVWV
RQGLVVFQFG LSVILIVGMI IIYRQVGFVQ NKNLGFDREN LVYFPIEGDL FSKFDLLKEQ
LTQVTGIKQV THMTANPASN GNGTDGITWP GSNPTEQVRF TPVGVGYDFT KTMNLKMADG
RDFSKDFPTD SSGVLVNQTA VKVMGLKNPV GREINWGQSK VRIVGVLKDF HFESLHKAIR
PLIAYLGARQ PQGSVVIRIQ AGKTPETLAA IEQICKKFNP NVPFTYAFTD QEYARQYQSE
QIVGKLAGYF AFLAIFISCL GLFGLAAFTA EQRTKEIGVR KVLGASVAGI VGLLSKDFLK
LVVMAIVLAS PVAWYIMKHW LQGFAYQINI EWWMFALAGI IAVLIAVFTI SFQSVRAAMV
NPVRSLKSE
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