Gene Dfer_1449 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_1449 
Symbol 
ID8225020 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp1716517 
End bp1717554 
Gene Length1038 bp 
Protein Length345 aa 
Translation table11 
GC content57% 
IMG OID644929308 
ProductLuciferase-like monooxygenase 
Protein accessionYP_003085860 
Protein GI255035239 
COG category[C] Energy production and conversion 
COG ID[COG2141] Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.537793 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAATAG GAATCAGTAT GTTCGGGGAC CTGGCTTTTA ACAATGCCAC CCGTTCTTTT 
CAGTCGCCGC AGGAGCGTTT GCAGGATATG TTGGAGGAAA TCAAGCTGGC CGATGAGGTA
GGGCTCGATG TTTTCGGGAT AGGGGAGCAC CACCGCCCGG ATTTCGCGGT GTCAGCGCCG
GAAATCATCC TTGCAGCGGC GGCTTCGGTT ACGAAAAACA TCAAACTGAC CAGCTCGGTG
ACCGTGCTCA GCTCGGCTGA TCCGGTGCGC ATCTACCAGA ACTTTTCGAC GGTGGACCTC
ATTTCGGGAG GCCGCGCGGA AATCACGGTC GGCCGCGGGA GCTTCATCGA ATCGTTTCCG
CTCTTTGGCT ATGATTTGAA TGATTACAAC GGCCTGTTTT CGGAAAAGCT GCAATTGTTG
AAGGAAATCA ATGAAAACGA CGTGATTACC TGGAAAGGCA AGTACCGCGC AACGCTCGAC
AGGCAGGAGG TTTTGCCGAG GGCGGTGAAC AATAACCTGG ACATCTGGGT GGCTGTGGGC
GGCACGCCGC AGTCGGTAGT GCGCGCGGCG CGGCTCGGTT TGCCATTGAT CATCGCGATC
ATCGGCGGTA TGCCGTCCCA GTTTCAGCCG TTTTTTGAAT TATATAAAAC AGAATACCTC
GAAGCAGGCC ACGATCCGGC CAAAATGCAG CTGGCAACGC ATTCGCACGG GCTTATCGGG
CTGGACGGCA AGGCGCTGAA CGATACTTAC TTTCCGTCGT ACGCTGCGCA AATGGACCGG
GTGGGCCGCA GCCGGGGCTG GGCGCCTTAC ACGCGCTCGC AGTTCGAAGG CGGGCAAACC
CGCAATGGCG CATTGTTCGT AGGAGAGCCT GCGGCCGTGG TGGACAAGAT CCTTTACCAT
CAGGAGATGT TCGGGCTCAC GCGCTTTCTG ATGCATACGG ACGTGGGTGC GCCTGCGCAC
AAGGACCTGA TGAAGTCCAT CGAATTGCTC GGCACGCATG TCGCTCCGGC GGTAAAAAAG
GCCCTTGCGG TAAAATAA
 
Protein sequence
MEIGISMFGD LAFNNATRSF QSPQERLQDM LEEIKLADEV GLDVFGIGEH HRPDFAVSAP 
EIILAAAASV TKNIKLTSSV TVLSSADPVR IYQNFSTVDL ISGGRAEITV GRGSFIESFP
LFGYDLNDYN GLFSEKLQLL KEINENDVIT WKGKYRATLD RQEVLPRAVN NNLDIWVAVG
GTPQSVVRAA RLGLPLIIAI IGGMPSQFQP FFELYKTEYL EAGHDPAKMQ LATHSHGLIG
LDGKALNDTY FPSYAAQMDR VGRSRGWAPY TRSQFEGGQT RNGALFVGEP AAVVDKILYH
QEMFGLTRFL MHTDVGAPAH KDLMKSIELL GTHVAPAVKK ALAVK