| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_1439 |
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| Symbol | |
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| ID | 8225010 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | + |
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| Start bp | 1705540 |
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| End bp | 1707123 |
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| Gene Length | 1584 bp |
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| Protein Length | 527 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 644929298 |
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| Product | RagB/SusD domain protein |
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| Protein accession | YP_003085850 |
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| Protein GI | 255035229 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.271044 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAACA GAAATATAAG ATACGCGGTC CTCGCTGCAT TGCTCGCCGG AGCGCCGCTC
TACTCCTGCA CCGACCTGAA CGAGGAAGTA TATTCCGAGG TGCTCGGCAG CAGTTACCAG
CCTACCGAGA AGGACCTTCC GGCGATTGTT GCGCCGGTGT ACTCCTCATT GCGCTCGCTG
ATGCTCGGCT GGCAAGGCTA CTTCGATTTG CAGGAAGAAG CCGCCGACGC GATCATCACG
CCGGTCCGCC CGAATGGATG GGACGATGGC GGCACGTACC GCCGGATGCA CCAGCACACG
TGGACGTCGC TGCAATGGCA ACCCGAAAAC GCGTGGCGCC AGGCATTTGC CAGCATTACC
ACGGTAAACC GGGTGCTTTC CCAGATTGAA GACGGCGATT TGCCCATTAC CAACGGCAAG
GACGCCACCA TCGCCGAGCT CCGCGCCGTG CGTGCATTTG CCTATTACCT TTTGCTGGAT
AACCACGGTA ATGTGCCCAT CGTGACCAAT TTCAAGGACG TAACGCTTCC CGAGCAAAGC
ACCCGTAAGG AGGTTTATGA ATTTGTGATT AAAGAACTGA CGGAAGCGCT GCCCAACCTG
AGCGAAAATG CGCAAACGAC CTATGGCCAA ATGAACAAAT GGGGTGCGAA AACGCTCCTG
GCTAAAATTT ACCTGAATGC GCAGGTCTAC ACCGGCACCG CACAATGGGC GAAGGCGATC
CAGGAGGCCG ACGACGTGAT CAAAAGTGGA AAATATACGC TGGATGCCAA TTATTCGGAT
GTATTTACCT GGACTAACTT CAACTCGAAG GAAATCATCT TCGCAATTCC CTACGACGAA
ATCTACGGAA CCGGCAACCA GATCCACATG AAAACGCTCG ACCCGCTGAG CCGCTCCGTG
TACCCGATGA ACGCCGGCCC GTGGGGCGGA AACTGTGCCG TGCCGCAGTT TATCGACACT
TACGACGCGG CCGACAGTCG CCTGGCCGAC ACCTGGATCA TGGGCCCGCA GAAAAGTGCT
GCCACCGGCG CCGTGGTGAT CACCTACAAC AAGGCCGTGC CAGGAATGGA CAAAACCACG
GTTCAGGACG GTTACCGCAT TGGCAAATAC AAAATCAAAC CCAATGCCAC CGGCAGCCTC
GACAACGACT TCCCGTTCCT GCGCTATGCG GATGTGCTGA TGATCAAGGC CGAGGCGTTA
CTGCGCACGG GCAAGGCGGC CGAAGCGGCG GAGATCGTTA CCCAGGTACG CCAGCGCGCA
TTTAAAGGCA CACCGGCGAA AGCGACCGTT ACCGCGGCCG ATCTGGCCAA GGGAAGCCGC
TATAACTATG GCTACCAGGC CACCGACGGC ACCATTACCG AGCGCCAGGG AGGCGACGAC
ATCCAGTTCG GCCGCTTTCT CGACGAGCTG GGCTGGGAGT TCGCCGCGGA GGCCCACCGC
CGCCAGGACC TGATCCGTTT CGGGGTGTAC GAAACCAAGA AATGGTTCAA CCACCGTCCG
GCGTCGGCCC AGCGCGCGCT CTTCCCGATC CCGCAGAACG AGCTCGACAA GAACCCGAAA
CTCAAACAGA ACCCGGGTTA CTGA
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| Protein sequence | MKNRNIRYAV LAALLAGAPL YSCTDLNEEV YSEVLGSSYQ PTEKDLPAIV APVYSSLRSL
MLGWQGYFDL QEEAADAIIT PVRPNGWDDG GTYRRMHQHT WTSLQWQPEN AWRQAFASIT
TVNRVLSQIE DGDLPITNGK DATIAELRAV RAFAYYLLLD NHGNVPIVTN FKDVTLPEQS
TRKEVYEFVI KELTEALPNL SENAQTTYGQ MNKWGAKTLL AKIYLNAQVY TGTAQWAKAI
QEADDVIKSG KYTLDANYSD VFTWTNFNSK EIIFAIPYDE IYGTGNQIHM KTLDPLSRSV
YPMNAGPWGG NCAVPQFIDT YDAADSRLAD TWIMGPQKSA ATGAVVITYN KAVPGMDKTT
VQDGYRIGKY KIKPNATGSL DNDFPFLRYA DVLMIKAEAL LRTGKAAEAA EIVTQVRQRA
FKGTPAKATV TAADLAKGSR YNYGYQATDG TITERQGGDD IQFGRFLDEL GWEFAAEAHR
RQDLIRFGVY ETKKWFNHRP ASAQRALFPI PQNELDKNPK LKQNPGY
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