| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_1432 |
|---|
| Symbol | |
|---|
| ID | 8225003 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dyadobacter fermentans DSM 18053 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013037 |
|---|
| Strand | - |
|---|
| Start bp | 1689826 |
|---|
| End bp | 1692060 |
|---|
| Gene Length | 2235 bp |
|---|
| Protein Length | 744 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 644929291 |
|---|
| Product | Xanthine dehydrogenase |
|---|
| Protein accession | YP_003085843 |
|---|
| Protein GI | 255035222 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1529] Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL homologs |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.0207663 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 0.0547153 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCAGAC AACCCATGGA TGACCCTTCG GATAGTTCGC TGAGCCGCGT CGACGGCGCG
GCAAAAGTGA CCGGCACCGC AACCTATTCC GCCGAATATG CCATTCCAGG CCTGGCCCAC
GCCGTGCTCG TCACGAGTAC CATTGCGAAA GGCAGCATTA AGGATATAGA ATCGCGCGAG
GCCGCGGCCG CCCCGGGCGT GCTCGCGGTG ATCAGCCACG TCGATGCGGT CGAGGTACCC
GGCTGGCCAG CCCGCAAGCA ACCCGCCGAA CGCGCCCCGA CCGGCACGGC GTTGCGCGTT
TTTTATGATC CGCTCATCTA TTTCGACGGC CAGCCCGTAG CGATGGTCGT GGCGGGAACG
CGCGAGCAGG CGGTACATGC GGCGTCGCTG GTGCGCGTGA CGTATCAGCA GGAAAAACAT
CAAACGCATT TTGAGAAAAA TACCCAAAAG GCCGTCGTTC CTCAAAATGT TCAGCGTTCC
AAAAGTTCGC CTTTTCAAGA CTATGACCGG GGTGATTCGG CTGGATTAAA TCAGGCACAC
ACCAAAATTG AAGCCGAATA CACCATCCCC ACCCAGCACC ACCAGCCGCT CGAACCGCAT
GCGATTATCG CCGTTTGGGA GGCGGAGGAC AAGCTTACGG TTTATGACAA AAACCAGGGC
GTCAAATCGG TGCAGGGACA GCTCGCCCAG GCCTTTAAAA TTCCAAGAGA AAATGTGCAG
GTGGTGGCGA AATACATCGG CGGGGCATTT GGCTCTGGCA TAAGGGTGTG GCCGCACACC
ATGGCGGCGG TGATGGCGGC ACGGCACCTG AAACGCCCCG TGAAGCTGGT TCTGGGCCGG
GAGCAGATGT TTACATCCGT TGGTTACCGG CCTTATACCG TCCAGAAAAT CAGCATGGGG
GCGGCGGCGG ACGGCAGGCT GCTCGGCATT GTGCATGAGG GCACGGGGCA AACGTCCATG
TACGAAGAGC ATCTCGAACG GACCGTCCTT GCGAGCCGCG CCCTGTACGC CTGTCCACAC
GTGGCGACGC GCTACCGGCT GCTTCCGCTC GACGTGAGTA CGCCTACGTG GATGCGCGGG
CCGGGCGATG CCACAGGTAT GTTCGCCCTG GAATCGGCTA TGGATGAGCT GGCATTTGCA
TTGAAAATGG ACCCGCTGGA ATTGCGGTTG AAGAATTATG CTGAAACCGA TCCGGAGCGG
AATCTGCCGT GGTCGGCCAA GTCGCTGAAA GCGTGTTACG AGCTGGGTGC CGGGAAATTT
CGCTGGCACG ACCGCCGGAT GGAACCGGCA TCGGTACGAC GGAACGGCAA GCTGGTCGGG
GTTGGAATGG CTTCGAGCCT TTACGGCTAT CACCGGCATC CGTCCAGGGC GCGGGCCGTG
CTGCATGCCG ACGGCTCAGT GACCGTTTCC AGCGCGACAA TGGACATCGG GCCGGGTACC
GGCACCGCCA TGACGCGCAT TGCGGCAAAA GTACTGGGGC TCGAAGCTAA AAAAGTTCGG
TTTGAGCTAG GCCATTCCAA CCTGCCCGAC GCGCCCGGCC AGAACGGCTC GTCCACGATC
CCGAGCGTGG GCTCGGCGGT GTATGTGACC TGCGAGGCCT TGAAGGCCAA GCTGCTTGCA
CTGGCCTCGG AAATGCCGGA GGGTAGATCA ATGGGGCCGA TGGTGGTCAG GGAAGGCCGG
GTGTTTGGCT CTACGGGCGG TCAGACCGGA ATTGCATTCT CGGAGATATT GAAGTACCAC
CGGCTGGACA GCCTGGAAGC AATGGAGGAA TCGAAGTCGG GTGCGGAGCG GGACCAGTAC
TCGATGTATT CTTTCGGGTG CCATTTCGTA GAGGTGGAGG TGGACCCGCT CACCTGCGAG
GTGCGCGTGA CCCGCGTGGT TACGTGCGCG GACGTGGGCG CGATCATCAA CCCGAAAACC
GCACGCAGCC AATCCATTGG CGGCGTAGTG GGTGGGATCG GCATGGCATT GATGGAGCAT
TCGCAAATGG ATCATCGCTT CGGGCGGTAC GTTACGACCG ACTTCGCCAG CTACCATATC
CCCGTGCATG CCGATGTCCC GCCTATCGAG GTGTACTACA TCGACAAGCC CGATCCGCAC
GCCAATCCCA TCGGTTCCAA AGGCTTGGGC GAAATCGCCA TCGTAGGCGT GGCAAGCGCC
ATTGCCAATG CGGTTTTCAA TGCTACGGGA AAGCGGATCA GGACATTGCC CATCACACCT
GATCAACTGG TATGA
|
|---|
| Protein sequence | MTRQPMDDPS DSSLSRVDGA AKVTGTATYS AEYAIPGLAH AVLVTSTIAK GSIKDIESRE
AAAAPGVLAV ISHVDAVEVP GWPARKQPAE RAPTGTALRV FYDPLIYFDG QPVAMVVAGT
REQAVHAASL VRVTYQQEKH QTHFEKNTQK AVVPQNVQRS KSSPFQDYDR GDSAGLNQAH
TKIEAEYTIP TQHHQPLEPH AIIAVWEAED KLTVYDKNQG VKSVQGQLAQ AFKIPRENVQ
VVAKYIGGAF GSGIRVWPHT MAAVMAARHL KRPVKLVLGR EQMFTSVGYR PYTVQKISMG
AAADGRLLGI VHEGTGQTSM YEEHLERTVL ASRALYACPH VATRYRLLPL DVSTPTWMRG
PGDATGMFAL ESAMDELAFA LKMDPLELRL KNYAETDPER NLPWSAKSLK ACYELGAGKF
RWHDRRMEPA SVRRNGKLVG VGMASSLYGY HRHPSRARAV LHADGSVTVS SATMDIGPGT
GTAMTRIAAK VLGLEAKKVR FELGHSNLPD APGQNGSSTI PSVGSAVYVT CEALKAKLLA
LASEMPEGRS MGPMVVREGR VFGSTGGQTG IAFSEILKYH RLDSLEAMEE SKSGAERDQY
SMYSFGCHFV EVEVDPLTCE VRVTRVVTCA DVGAIINPKT ARSQSIGGVV GGIGMALMEH
SQMDHRFGRY VTTDFASYHI PVHADVPPIE VYYIDKPDPH ANPIGSKGLG EIAIVGVASA
IANAVFNATG KRIRTLPITP DQLV
|
|---|
| |