| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_1423 |
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| Symbol | |
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| ID | 8224994 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | - |
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| Start bp | 1679787 |
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| End bp | 1680329 |
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| Gene Length | 543 bp |
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| Protein Length | 180 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 644929283 |
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| Product | transcriptional regulator, LuxR family |
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| Protein accession | YP_003085835 |
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| Protein GI | 255035214 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family
[TIGR02985] RNA polymerase sigma-70 factor, Bacteroides expansion family 1 |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 0.568122 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.0182101 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACGCTGA TTTGCGAGCA GGATGAGGAG TTGGCTTTCA GGGAGTTGTA CCGCAGGCAT
GTGCGGCTGC TCGTGCATAC CGCTATCCGC AAAACGGGCA GGAAAGCCAT CGCGGAGGAC
CTTGTGCAGG AAACTTTTGT GAAGTTCTGG CTCGGGCGGC ACAAGTTTGA TATCCAGAAA
AATATCCAGG CCTACCTCAA TGGCACGCTT CGCCATTGCA TTATCAATTA CTACCACCAG
GAGCAGCGCA AACAGATCTC GACGCTCGAA GAAGATGATT TCGTGCCCGA TAATGTTACC
GCCGAAGACC TCGATTTCAA TACCCTCAAC GAGTTTTACG AACAGTCGCT GCTCAAACTG
CCCGAGAAAT GCCGGGAGGT TTTCTCGCTC AGCCGCAAAG GTTACAGCCT CAAAGAAATC
GCCGGTCAGA TGGAAATTTC GGAGAAAACG GTGGAAGCCC ACATCAGTAA AGCGCTCAAA
ATCCTCCGCG TGGAAATGAA AGATTACATC GCGCTGGCCG TCCTTATGCT GCCCGTCATT
TGA
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| Protein sequence | MTLICEQDEE LAFRELYRRH VRLLVHTAIR KTGRKAIAED LVQETFVKFW LGRHKFDIQK
NIQAYLNGTL RHCIINYYHQ EQRKQISTLE EDDFVPDNVT AEDLDFNTLN EFYEQSLLKL
PEKCREVFSL SRKGYSLKEI AGQMEISEKT VEAHISKALK ILRVEMKDYI ALAVLMLPVI
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