| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_1409 |
|---|
| Symbol | |
|---|
| ID | 8224980 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dyadobacter fermentans DSM 18053 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013037 |
|---|
| Strand | - |
|---|
| Start bp | 1659157 |
|---|
| End bp | 1660011 |
|---|
| Gene Length | 855 bp |
|---|
| Protein Length | 284 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 644929269 |
|---|
| Product | 2-hydroxy-3-oxopropionate reductase |
|---|
| Protein accession | YP_003085821 |
|---|
| Protein GI | 255035200 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG2084] 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases |
|---|
| TIGRFAM ID | [TIGR01505] 2-hydroxy-3-oxopropionate reductase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.0135816 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 0.686311 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAGAAAA TAGGTTTTAT AGGGCTGGGA ATCATGGGAA AACCGATGGC GCTCAACCTG
CTGAAAGCGG GTTATCCGGT GGGCGTGCTC GCCACGAGCC AGGCATCGGC CATTTTGAAT
GACGCCGGAG CGAAAATATG GCCGGATGCA GCCGCCCTTG CATCGGCCAG CGACATCATC
ATTACCATGC TGCCGGATTC GCCGCAGGTG GAGGAGGTCG TGAACAGCGG CGTACTAAGC
GGCGTTCGTG CGGGCAGCCT TTTTATTGAT ATGTCCACCA TTGCACCGCT CGTCGCCCGC
AACCTTTTCG ACGCCATGCG GGAGCGCGGC GTGGAGGCGC TGGACGCGCC GGTGTCGGGC
GGACAGGTAG GCGCGGAGGG TGCTGCATTG TCCATTATGG TAGGCGGCAG CGCGGCTGCA
TTCGGGAGAG CGCTGCCCGT GTTTCAGGCC ATGGGCAAAA ACATTGTGCA TATCGGCGAG
CCCGGTGCGG GACAAACTAC CAAAGCATGC AATCAGATGA TCGTAGGGCA GACGATCCAG
GCGGTTGCAG AGGCATTTAC ATTGGCTCAA AAAGCGGGCG TGGATTTGGT CAAAATGCGG
GAAGTACTGC TAGGCGGTTT CGCGCAAAGC CGCATTCTCG ACCTTCACGG CCAGCGGATC
ATCGACCAGA ATTTCAAGCC CGGTTTTAAA ATCAAATTAC ACCAGAAAGA CATCGGCATT
GCCCTCAAAA CCGGCCGCGA ACTCCAAGTC ACACTGCCCG GAACCGAAAC CGTGGCACGG
CAAATGGAAG CCGCCATGCA GCAGGGCAAC GGCGAACTGG ACCATAGTGC CCTGTTTCTC
AACCTCGGGC ATTAG
|
|---|
| Protein sequence | MEKIGFIGLG IMGKPMALNL LKAGYPVGVL ATSQASAILN DAGAKIWPDA AALASASDII
ITMLPDSPQV EEVVNSGVLS GVRAGSLFID MSTIAPLVAR NLFDAMRERG VEALDAPVSG
GQVGAEGAAL SIMVGGSAAA FGRALPVFQA MGKNIVHIGE PGAGQTTKAC NQMIVGQTIQ
AVAEAFTLAQ KAGVDLVKMR EVLLGGFAQS RILDLHGQRI IDQNFKPGFK IKLHQKDIGI
ALKTGRELQV TLPGTETVAR QMEAAMQQGN GELDHSALFL NLGH
|
|---|
| |