| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_1407 |
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| Symbol | |
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| ID | 8224978 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | - |
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| Start bp | 1656402 |
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| End bp | 1657691 |
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| Gene Length | 1290 bp |
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| Protein Length | 429 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 644929267 |
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| Product | Mandelate racemase/muconate lactonizing protein |
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| Protein accession | YP_003085819 |
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| Protein GI | 255035198 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[R] General function prediction only |
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| COG ID | [COG4948] L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.0463415 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.702374 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCACTCA TCCAAGAAAT CCACATCACT CCCATTGCCA TCGTCGATCC GCCGTTGCTG
AATGCTGCCG GGCTGCATGC GCCTTATGCG CTGCGGACGG TGGTGGAGAT TGTTACCGAC
GACCGCATTT CGGGCATTAG CGAAATCCCC GGTAATGCGG ACATCGATGC TGCGCTGGAA
GAAGCGAAAG CATTGCTGAT CGGCCGCGAT CCTTTTAACC TGAATGTGAT CCGGCAGGTG
CTTGCGGGAC ATTTCGGGAC GGAATCGGCC GCTGCGCGCG GGGATGCGCC CTGGGACCAG
CGGAAGCTCG TGCACATTTT CAGCTCGGTG GAAGTGGCCT GCCTGGACAT TATCGGCAAA
ATCACCGGTC GTCCGGTGGT CGATCTGCTG GGCGGGAAAA TGCGGGATAG GGTGCCTTTT
TCCGCTTATC TGTTCTACAA GTTCGAGGGC GCTGGCGGCC CGCTGGGGTT TGGGACGGAC
CCGTATGCAA CTGGCTGGGC CGCAGCGCGC CAGGCTGCCG CGCTCGACCC CGAGAGCATC
GTCGAGCAAG CGCGTGCGAT GTGTAAAGAA TTTGGTTTTC AGTCCATTAA ATTAAAAGGA
GGCGTTTTTG AGCCGCGGGT CGAGGTAGAT TCTATGCTCG CATTGCACAG GGCATTCGGG
CCTGCCGTAC CGCTGCGCGT CGATCCGAAT GCGATTTGGG AAGTGGACAC GGCGATCCGC
TACGGCCGAG AGCTGAAAGG CATTTTGGAA TACCTCGAAG ACCCCGTGCG CGGACAGGAA
AATATGGCCA GAGTCCGAAA GGAACTTGGC ATTCCCCTGG CTACCAACAT GTGTACCACG
TCGTTCGGCG ACATCCCGAG GAGCATTGAG CTGGGCTCGG AGGACATTAT CCTCAGCGAT
CATCATTTCT GGGGCGGCCT GCGGGCGTCG ATGACGCTAT CGGGCATTTG CGAAACATTC
GGGCGCGGAC TTTCCATGCA TTCCAACAGC CATTTGGGCA TATCGCTTGC TGCCATGGTT
CACCTCGGCG CGGCGCTGCC CGGCGTGCCC TATGCGCTCG ATACGCATTA TCCCTGGCAA
AGCGACGAGG TGATCGTCGG CGGACGGATT CAGTTCGACG AAGGCAGTGT GGCCGTGCCC
ACCGGCCCCG GTTTGGGTGT GGAGCTGGAT CGGGCGGCAT TGCAAAAACT ACATCAGAAT
TACCTCGAAT GCGGCCTTAA AAAGCGCGAC GACGAGATTG AAATGCAAAA AAAGGTGCCC
GGCTGGGAGT TCAAGGCCGT GCGCTGGTAG
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| Protein sequence | MPLIQEIHIT PIAIVDPPLL NAAGLHAPYA LRTVVEIVTD DRISGISEIP GNADIDAALE
EAKALLIGRD PFNLNVIRQV LAGHFGTESA AARGDAPWDQ RKLVHIFSSV EVACLDIIGK
ITGRPVVDLL GGKMRDRVPF SAYLFYKFEG AGGPLGFGTD PYATGWAAAR QAAALDPESI
VEQARAMCKE FGFQSIKLKG GVFEPRVEVD SMLALHRAFG PAVPLRVDPN AIWEVDTAIR
YGRELKGILE YLEDPVRGQE NMARVRKELG IPLATNMCTT SFGDIPRSIE LGSEDIILSD
HHFWGGLRAS MTLSGICETF GRGLSMHSNS HLGISLAAMV HLGAALPGVP YALDTHYPWQ
SDEVIVGGRI QFDEGSVAVP TGPGLGVELD RAALQKLHQN YLECGLKKRD DEIEMQKKVP
GWEFKAVRW
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