| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_1406 |
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| Symbol | |
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| ID | 8224977 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | + |
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| Start bp | 1655518 |
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| End bp | 1656396 |
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| Gene Length | 879 bp |
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| Protein Length | 292 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 644929266 |
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| Product | Xylose isomerase domain protein TIM barrel |
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| Protein accession | YP_003085818 |
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| Protein GI | 255035197 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1082] Sugar phosphate isomerases/epimerases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.179801 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.416427 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCATCG ACAGAAAGAC TTTCCTTCAA AACCTCTCCA TTGCGGCCGG GGCCGCGCTC
CTGCCCGACC TGACCCAAGC CAGCCCGTAT ATTTGGAAAA AACCCAAAAT GCAGCTCGGC
TTCGTGACCT ATCTGTGGGG TAAGGACTGG GATGTGCCGA CATTGATCAA AAACCTTTCT
GACACACACA TTACCGGCGT CGAACTTCGT GTGGAGCACG CGCACAAGGT CATGCCCGAC
CTCACAGCCG GGCAGCGGAA AGAGGTAAAA AAACAGTTTG CCGACAGCCC CGTGAAGATC
GTGGGCCTCG GTACGAACCA GCAATACGAC TATCCCGACC AGGAAAAACT CAAAGCTTCC
ATCGAAAAGA CCAAGGACTT CATCCGCCTC AGCGCCGACG TAGGCGGTAC GGGCGTGAAA
GTGAAACCCA ATGCGTTACA CAAAGAAGTC CCAACGGAAA AAACGTTGGA GCAAATCGGG
CTCTCGCTGC ACGCGTTAGC GGCATACGCG GCCGATTTTG GTCAGCAGCT GCGGCTCGAA
GTGCATGGCG AAGAGACCCA GGAACTGCCC AACATCCGCA AAATCATGGA TTATGCCGAT
CATAAGAATG CCAAAATCTG CTGGAACTGC AACAAGCAGG ACCTGAATGG CGAGGGCTTT
CAATACAATT TCGACCTCGT GAAAAAGTAT TTTGGCGATA CCTGCCACGT CCGCGAGCTC
GACCGCACCG ATTACCCCTA CCCCGAACTG ATCGACAATC TTGCCAAAAT GGATTACAAA
GGCTGGGTAT TGCTCGAATG CCACACCAAT CCCGATGACA AAATCAGTGC CCTGCAACAA
CAACGCAAGG TTTTCGACCA AATGATGGCT AAATATTGA
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| Protein sequence | MRIDRKTFLQ NLSIAAGAAL LPDLTQASPY IWKKPKMQLG FVTYLWGKDW DVPTLIKNLS
DTHITGVELR VEHAHKVMPD LTAGQRKEVK KQFADSPVKI VGLGTNQQYD YPDQEKLKAS
IEKTKDFIRL SADVGGTGVK VKPNALHKEV PTEKTLEQIG LSLHALAAYA ADFGQQLRLE
VHGEETQELP NIRKIMDYAD HKNAKICWNC NKQDLNGEGF QYNFDLVKKY FGDTCHVREL
DRTDYPYPEL IDNLAKMDYK GWVLLECHTN PDDKISALQQ QRKVFDQMMA KY
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