| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_1385 |
|---|
| Symbol | |
|---|
| ID | 8224956 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dyadobacter fermentans DSM 18053 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013037 |
|---|
| Strand | - |
|---|
| Start bp | 1631349 |
|---|
| End bp | 1632206 |
|---|
| Gene Length | 858 bp |
|---|
| Protein Length | 285 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 644929245 |
|---|
| Product | NAD-dependent epimerase/dehydratase |
|---|
| Protein accession | YP_003085797 |
|---|
| Protein GI | 255035176 |
|---|
| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0702] Predicted nucleoside-diphosphate-sugar epimerases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATAGCCA TCACAGGAGC AAACGGAAAC CTTGGAAAAG CCACACTCGC ATTCCTTTTG
AAAAAAACAT TACCGGGCAA CATCGTCGCC ATTGTGCGTG ATGCAGGTAA GCTCAGCGAA
TACATCGGTT CGGGAATCCA TATCCGCACG GCAGATTATG AAGATCAGCA GTCGTTGGAG
AAGGCGCTGA AAGGCGTGCA CAGGCTGTTG CAGATCTCCG CTTCGGCCAC GGGCGTCCGG
GCAATGGCGC AGGAAACGCG CGTGGTGCAG GCCGCCGTGC GCTGCGGAGT GAAAGAAATC
GCTTACACCA GCACGCTGTT CCCCCACGAA TCGGCCCATT TTCACGCAGC GCATATTTGC
CGCAATACCG AGGAACTGAT CCGGCAGAGC GGCATGCGTT ACGTCTTGTT CCGCAACAGC
ATGTACCATG AAACGATCCC GCTGTTTATC GGCGAAGCCA TGGGCGACGG CCGGATCTTT
TACCCGTCGG GCAGCGGGCG CGTGAGTTTC GCGTCGCGGA AGGACATTGC CGAGGCGCTG
TCCAATGTGC TCACCGGCCC GACTTTCAAC AACGCGACGT TCGATATTAC CGGCGCGGAG
ACATTCAGTT TTGCGGACAT TGCATTAACA TTAAAAGATA TAGCAGGCTA CCACGACGCC
GCGCACACCG ATATTTCGCC GGAAGATTAC CGTAAAGGAC TGCTCGGTTT CGGGCTGGGC
GAGGATGAGG CCGGGTTTTA TGCCAGCATG GCCGACAGCA TCCGCGCAGG CGAATTTGAA
AAAACGCATC ATTCGCTCGA AGGCTTCCTG GGACGCAAAC CGCTTGGGGT TCAGCAATAT
CTGAAAGAAT TGTTTTGA
|
|---|
| Protein sequence | MIAITGANGN LGKATLAFLL KKTLPGNIVA IVRDAGKLSE YIGSGIHIRT ADYEDQQSLE
KALKGVHRLL QISASATGVR AMAQETRVVQ AAVRCGVKEI AYTSTLFPHE SAHFHAAHIC
RNTEELIRQS GMRYVLFRNS MYHETIPLFI GEAMGDGRIF YPSGSGRVSF ASRKDIAEAL
SNVLTGPTFN NATFDITGAE TFSFADIALT LKDIAGYHDA AHTDISPEDY RKGLLGFGLG
EDEAGFYASM ADSIRAGEFE KTHHSLEGFL GRKPLGVQQY LKELF
|
|---|
| |