| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_1379 |
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| Symbol | |
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| ID | 8224950 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | - |
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| Start bp | 1620996 |
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| End bp | 1622720 |
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| Gene Length | 1725 bp |
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| Protein Length | 574 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 644929239 |
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| Product | RagB/SusD domain protein |
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| Protein accession | YP_003085791 |
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| Protein GI | 255035170 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.390197 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAATAC TACACCGATT TCTCCTGATT TTCACGCTCA CGGGCCTGCT TTCGTGCAGC
GACGATTTCG TCAATGTCGA AAACCCGGGC GCATTGGCAC CTTCGCAATA CCCGTCCACG
GTAGCTGAAC TAGAACAGCT GCTCACCGGC GTGTACGGCA CGCAGCACGC CACGGGCCTC
TACGGGCACA CCATGCTTGG CAAAAATCTC TGGCTTTGGG ACCACACGCT TGATTTGAGC
TGGCAGGGAA CACCCACCTG GATTCAGATG GGCCAGAACA ATTCGCAGCC CAACGACAGC
TTCCTGTACG ACACCTGGCG CGAACTATGG CGCGGCGTGC AGCGCAGCAA TACTTTGCTG
GCCGGCATTG AAACCTACCG CCAGAAAGCG CCGAACGACG CGGCGACCAT TGACGTGATC
AAAGGACAGG CGCTGTTCCT GCGCGCGTGG TACTATTTCC ACCTCGTGTC GTTCTGGGGT
GAGGGCTTCA ATGCGGCCAC GGACGGTGCT AAAATGGGCG TGCCGATCAT CACCGAAGTG
GCGTCGGGCC TCGATGAAAC GCAGGTGCCA CGCAAGACCG TAAAGGAAGG CTGGGATTTC
ATCATCGCCG ACCTCAAAGC AGCCGAAGGC CTTCTCAAAA ACACCAACTG GACCGGCGCT
ACCGACAAGC ACAAAGTGTC GGGCTGGGCG GTGAAAGGGT TTTTGGGAAA AGTGTACACC
TATCAGGCCG ATTGGGCAAA TGCGAAAACC TACCTGGCCG ATGTGGTGAA CAACAGCGGC
AAGTCGCTCG TGTCGTTTGA TGTGTACAAG GATATGTTCA ATGGTAAAAA TGAGTTTACT
TCCGAATCCC TTTTTGAACT GAACCTGAAC GTGGACATGA CCGCGCGCGG GGGCGACGAC
CAGTCGATGG GATCGAGCAT CGGGATGGTG ATCGCGCCTA CCTATGTGAA CGACAATGGC
GGGCAGGCGG CTTCGGCCTG GTCCAATGTG TTCCCGCATG CCAAAAACAT CGCGCGTTTC
GGCTTCAATG AAGGGCATTA TTTCAAACCC GGCACCACCA GTGCGAACAT CGCCAATGTG
GACCCTGCCT ACATCACCCG TTCCCTTGAA GCGAAAAAGA AGCAAACCGT AGACCCGCGC
CTGTGGGTGG CTTGCTATCA GCCTTACGTG GACTCGATGG TGGTAAATGG CCGAAAACGC
CCGATCTCGC ATTATCTCGA CATAACCGAG CTGGATATGG AGGCGTGGAG CTTCCGGAAA
TTCACAAACC CGAACGGAAC GGAAGCGGAG ATCAACATGT CGAATGGTGC CAACTTCCCG
TGGCTGAGGC TGGCCGACGT GTACCTGCTG TATGCGGAAA CACTCGCTAA ATCAGGTGAT
AATGCGGGTG CATTGGAATA CATTAATAAG GTCAAACGGC GCGCGTACGG CTTACCGGTG
AACACGCCTT CCGCAATGGA TTACAAAAGT CTCACCGACC AGACCAAGGC CACGGACGCC
GTCCTGAAAA ACGACCCGCT CAAATACGAG CGCTGGGCCG AGCTCTTCGC CGAAGGACAC
TGGTGGCTCG ACGTCCGCCG CTGGCAAATC GGTGACAAGG AAGCGGCTTA CTATCAGCGG
ATTCGCGGCG GGGCCATTCA ATGGGACCCG ACCGATTACG CTCAGCCGAT CCCGATCAAC
GAAATCACCG CCAACGTAAA CATGCGGCAA AATCCGGGAT ATTGA
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| Protein sequence | MKILHRFLLI FTLTGLLSCS DDFVNVENPG ALAPSQYPST VAELEQLLTG VYGTQHATGL
YGHTMLGKNL WLWDHTLDLS WQGTPTWIQM GQNNSQPNDS FLYDTWRELW RGVQRSNTLL
AGIETYRQKA PNDAATIDVI KGQALFLRAW YYFHLVSFWG EGFNAATDGA KMGVPIITEV
ASGLDETQVP RKTVKEGWDF IIADLKAAEG LLKNTNWTGA TDKHKVSGWA VKGFLGKVYT
YQADWANAKT YLADVVNNSG KSLVSFDVYK DMFNGKNEFT SESLFELNLN VDMTARGGDD
QSMGSSIGMV IAPTYVNDNG GQAASAWSNV FPHAKNIARF GFNEGHYFKP GTTSANIANV
DPAYITRSLE AKKKQTVDPR LWVACYQPYV DSMVVNGRKR PISHYLDITE LDMEAWSFRK
FTNPNGTEAE INMSNGANFP WLRLADVYLL YAETLAKSGD NAGALEYINK VKRRAYGLPV
NTPSAMDYKS LTDQTKATDA VLKNDPLKYE RWAELFAEGH WWLDVRRWQI GDKEAAYYQR
IRGGAIQWDP TDYAQPIPIN EITANVNMRQ NPGY
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