| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_1374 |
|---|
| Symbol | |
|---|
| ID | 8224945 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dyadobacter fermentans DSM 18053 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013037 |
|---|
| Strand | - |
|---|
| Start bp | 1612781 |
|---|
| End bp | 1614013 |
|---|
| Gene Length | 1233 bp |
|---|
| Protein Length | 410 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 644929234 |
|---|
| Product | lipolytic protein G-D-S-L family |
|---|
| Protein accession | YP_003085786 |
|---|
| Protein GI | 255035165 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 40 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 0.221741 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGAAGTT TCAGACTGCC GGCAACCCCG GTTTGTGTTT TTCTGTTGTT ACTAACCCTC
GTCTGCGGAC CATCCCTTGC TCAAAACAAA AGCCCGAATG CATTCACATT GAAAGACGGC
GACCGTGTCG TTTTTCTGGG TAATTCCATT TTTGAAAACG AATTCCAGTA CGGTTACCTG
GAACTCGCGC TCACGACCCG TTTTGCCGAT AAAGGCATTA CTTTCCGCAA CCTCGGCTGG
ACGGGCGACA ATGTTTGGGG CCAGGCGCGC AGCACCTACA CCAACCCGCC GACACCCTAC
GAGCACCTGA TGCAGGACAT TACCAATGCC GCCCCGACGG TCGTTTTCCT CGCTTACGGA
GGCGTGGAGG CTCAGGAAGG GCAGGATGGC GTGGCGCATT TTAAGGATGG TTTGAATAAA
CTCATCGATA AAATAGACGC GCTCGGCGCC AGGGCTGTGC TGCTTTCCAC GATTCCCGTC
GTGTCGTCGG ATACATCGCA GCGCATCGGC CCGCGGAATG CGGAACTGGA ATTGTATTCC
AAAGCGATTT CGGATGTGGC ATCGCAGCGC AGCAAGCAGT TTATCGACAT TTACAACCCC
GTGCTCGAAA GGAGCAAAAA GGCGGACATT ATCGAAAACA CCGTGCATTT GAACGAAGCG
GGTTACTATT TCCTCGCCGG GGTGCTCGAA AAAGCGCTGG GCCTGCCGAC CGACCGCGAG
ACTTCCACGA TCACGATCGG CAAGCCCTCG CCCTATTCAT CCAATGTGAG AATCCTCACG
GACGACACAA ACGGCGACGC GATCGTGCGG TTTGTGGCAA CCGACAAATA CCTGCCGCTG
CCGTTCCCGC AAGCCGGAAA CCAGGTCGGC GATAATGCCA ATGTGATCCG GGTGGTGGGT
TTGAAAAAAG GCTATTACAC GTTGACTGCG GCCAACAACC AGGTTGTGAC TGCATCTGCC
CGGGATTGGG AAAAAGGCGT GGCGATCGTG CAAGGTCCGC AGTTTGAGCA ATCGGCGCGG
ATCAGGGAGA TGATGATCCG CAAAAACGAA TTGCACTTTT TCCAGTACCG TCCGTTGAAC
CAGACCTACA TTATCGGTTT CCGCAAATAC GAGCAGGGAC GCCATGTGAA GGGCCTTGAA
GAGCAGAATA TCCTGATCAA ATGGCTCGAA GGGCAGATTA TCCTCAACAG CGAACCGAAG
GAAGTCGTGT ATGAGTTGCG GAAATTGGAA TGA
|
|---|
| Protein sequence | MRSFRLPATP VCVFLLLLTL VCGPSLAQNK SPNAFTLKDG DRVVFLGNSI FENEFQYGYL
ELALTTRFAD KGITFRNLGW TGDNVWGQAR STYTNPPTPY EHLMQDITNA APTVVFLAYG
GVEAQEGQDG VAHFKDGLNK LIDKIDALGA RAVLLSTIPV VSSDTSQRIG PRNAELELYS
KAISDVASQR SKQFIDIYNP VLERSKKADI IENTVHLNEA GYYFLAGVLE KALGLPTDRE
TSTITIGKPS PYSSNVRILT DDTNGDAIVR FVATDKYLPL PFPQAGNQVG DNANVIRVVG
LKKGYYTLTA ANNQVVTASA RDWEKGVAIV QGPQFEQSAR IREMMIRKNE LHFFQYRPLN
QTYIIGFRKY EQGRHVKGLE EQNILIKWLE GQIILNSEPK EVVYELRKLE
|
|---|
| |