Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dfer_1351 |
Symbol | |
ID | 8224922 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dyadobacter fermentans DSM 18053 |
Kingdom | Bacteria |
Replicon accession | NC_013037 |
Strand | - |
Start bp | 1589063 |
End bp | 1589827 |
Gene Length | 765 bp |
Protein Length | 254 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 644929212 |
Product | Trans-aconitate 2-methyltransferase |
Protein accession | YP_003085764 |
Protein GI | 255035143 |
COG category | [R] General function prediction only |
COG ID | [COG4106] Trans-aconitate methyltransferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 41 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.0825265 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCTGGA ACCCCGAAGT GTATAATAAG TTTAAATCAG AGCGCTCGGC GCCGTTTTAC GATTTGATGG CGTTGCTGAA AGTCCGGCCG GGGCTGGAAG TGATCGATTT GGGTTGCGGA ACGGGCGAAT TAACGGCCAA GTTGGCTGAT ACCCTGCCGG AATCCCGGGT CTTGGGCGTG GATTCTTCCC AGGAAATGCT GGGCAGTTCA CAAAAAGCGA ATGGTAGTAC ATTGAATTTT GAATGCATCA CGATCGAAAA CCAGCTCGAA AAGCCGCAGC AATGGGATGT GGTTTTCTCC AATGCAGCCT TGCAATGGAT ACCGGATCAT CGCGCGCTAT TCCCCCGGCT CATTTCCAAA ATAAAGCCCG GCGGCCAGCT GCTGGTGCAA ATGCCTGCCC AGCATCACAA CCTAACCAAC CGTTTGCTCA ATGAGCTCGC CACACGGGAA ACTTATGCAT CGGCATACGA GGGCTGGAAC CGCCTGTCAC CCGTATTGGA ACTGGACAGT TACGCCCAGC TGCTTTTCGA AAACGGAAGC AAATCCATGC AGGTGTCTGA AAAAATATAC CCGCTCGTGC TGAACGACGT GGACGCGCTG CTGACCTGGG TTTCCGGCAC GGCACTGATT CCCTACCTCC AACGCTTGCC GGAGGAGTTG AAAGCGGTAT TTGTAGAAGA TTACAAGGCA ATGCTAAAAA GCCACTTCCC GAAAACCCCT GTTTTTTATC CGTTTAAGCG GATCTTGATA GGGGCGGAAT TTTGA
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Protein sequence | MAWNPEVYNK FKSERSAPFY DLMALLKVRP GLEVIDLGCG TGELTAKLAD TLPESRVLGV DSSQEMLGSS QKANGSTLNF ECITIENQLE KPQQWDVVFS NAALQWIPDH RALFPRLISK IKPGGQLLVQ MPAQHHNLTN RLLNELATRE TYASAYEGWN RLSPVLELDS YAQLLFENGS KSMQVSEKIY PLVLNDVDAL LTWVSGTALI PYLQRLPEEL KAVFVEDYKA MLKSHFPKTP VFYPFKRILI GAEF
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