Gene Dfer_1337 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_1337 
Symbol 
ID8224908 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp1570225 
End bp1570740 
Gene Length516 bp 
Protein Length171 aa 
Translation table11 
GC content54% 
IMG OID644929198 
ProductTail Collar domain protein 
Protein accessionYP_003085750 
Protein GI255035129 
COG category[S] Function unknown 
COG ID[COG4675] Microcystin-dependent protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones44 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGACAAC CTTACGTCGG AGAAATCAGA ATGTTCGCCG GCTCTTTCGC ACCTGCCGGA 
TGGGCTTTCT GCAGCGGTCA AACGCTTCCT ATATCTGAAA ATGACGTGCT CTTTCAACTG
ATCGGCACAA CTTATGGCGG CGATGGCCAG GAAACCTTCA ACCTGCCCGA CCTTCGCGGG
CGGCTTCCCC TGCACATGGG TACCGGAAAA TTCGGGAATA CGTATCAGAT CGGTGAATCG
GCCGGAACGG AGAGCGTCAC CCTGTCCACC CAGCAGATTC CCAACCATAC CCACAGCTTT
CGGGCGAGCA ATGACATTGC CAACTCCGGA AGTCCGAATA ATTCGGTCAT AGGGGTATCG
AGCTCAACCT CTGTTTTCAT CGCGGATCTT GCATCCGAGC CGATGAAACC TGCGCTGAGC
CCTGTCGGCG GCAACCAGCC ACACGAGAAT ATGCAGCCCT TTCTGTGTAT CAGCTTTATC
ATTTCGTTGT TCGGCATTTT CCCTTCGCAG ACTTAG
 
Protein sequence
MGQPYVGEIR MFAGSFAPAG WAFCSGQTLP ISENDVLFQL IGTTYGGDGQ ETFNLPDLRG 
RLPLHMGTGK FGNTYQIGES AGTESVTLST QQIPNHTHSF RASNDIANSG SPNNSVIGVS
SSTSVFIADL ASEPMKPALS PVGGNQPHEN MQPFLCISFI ISLFGIFPSQ T