Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dfer_1337 |
Symbol | |
ID | 8224908 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dyadobacter fermentans DSM 18053 |
Kingdom | Bacteria |
Replicon accession | NC_013037 |
Strand | + |
Start bp | 1570225 |
End bp | 1570740 |
Gene Length | 516 bp |
Protein Length | 171 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 644929198 |
Product | Tail Collar domain protein |
Protein accession | YP_003085750 |
Protein GI | 255035129 |
COG category | [S] Function unknown |
COG ID | [COG4675] Microcystin-dependent protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 44 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGACAAC CTTACGTCGG AGAAATCAGA ATGTTCGCCG GCTCTTTCGC ACCTGCCGGA TGGGCTTTCT GCAGCGGTCA AACGCTTCCT ATATCTGAAA ATGACGTGCT CTTTCAACTG ATCGGCACAA CTTATGGCGG CGATGGCCAG GAAACCTTCA ACCTGCCCGA CCTTCGCGGG CGGCTTCCCC TGCACATGGG TACCGGAAAA TTCGGGAATA CGTATCAGAT CGGTGAATCG GCCGGAACGG AGAGCGTCAC CCTGTCCACC CAGCAGATTC CCAACCATAC CCACAGCTTT CGGGCGAGCA ATGACATTGC CAACTCCGGA AGTCCGAATA ATTCGGTCAT AGGGGTATCG AGCTCAACCT CTGTTTTCAT CGCGGATCTT GCATCCGAGC CGATGAAACC TGCGCTGAGC CCTGTCGGCG GCAACCAGCC ACACGAGAAT ATGCAGCCCT TTCTGTGTAT CAGCTTTATC ATTTCGTTGT TCGGCATTTT CCCTTCGCAG ACTTAG
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Protein sequence | MGQPYVGEIR MFAGSFAPAG WAFCSGQTLP ISENDVLFQL IGTTYGGDGQ ETFNLPDLRG RLPLHMGTGK FGNTYQIGES AGTESVTLST QQIPNHTHSF RASNDIANSG SPNNSVIGVS SSTSVFIADL ASEPMKPALS PVGGNQPHEN MQPFLCISFI ISLFGIFPSQ T
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