| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_1327 |
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| Symbol | |
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| ID | 8224898 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | - |
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| Start bp | 1557200 |
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| End bp | 1559455 |
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| Gene Length | 2256 bp |
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| Protein Length | 751 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 644929188 |
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| Product | ABC transporter related |
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| Protein accession | YP_003085740 |
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| Protein GI | 255035119 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0178] Excinuclease ATPase subunit |
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| TIGRFAM ID | [TIGR00630] excinuclease ABC, A subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATCAAC AGGAGTACAT CCGCATTCGC GGGGCCAGGG AGAATAATCT TAAAAATGTT
TCATTAGACA TTCCGAAACG CAAAATTACG ATCTTCACGG GCGTTTCGGG GTCAGGCAAA
TCATCTATCG TTTTTGATAC CATCGGCGCA GAGGCGCAGC GCCAGCTGAA TGAGACTTTC
AGCATGTTTA TCCGCAACCG ACTGCCGCGC ATCAGCCAGC CTGAGGCCGA CGCGATCGAA
AACCTTTCTA CTTCCATTGT CATTGATCAG AAGCGCCTTG GCGGCAATTC CAGATCGACT
ATGGGCACAA TTACCGACAT TTCAGCGGTG CTCAGACTGC TCTTTTCGCG CCTTGGAAAA
CCTCATGCGG GCTTTTCCAA CGCATTTTCT TTCAATGACC CTGCCGGCAT GTGTCTCGAA
TGCAACGGCC TGGGCAAGAA GGTCGAGCTG GACCTCGAAA AGTTCCTCGA TCCGACCAAG
TCGCTCAACG AAGGGGCGAT CCTTTTTCCG GTGTTCGCCG TGGGCACGTG GTATTGGAAA
GCCTACACGT TTTCGGGCAT GCTGGATAAT GATAAAAAGC TTGAAGATTA TTCCGACGAC
GAAATGCACA TGCTGCTTTA CGGGAAGGGC ACGTATGAAT CCAATTACAA TGGGTCGGTG
TTTGAAACGA AGTACGAGGG GCTCGTCGAT AAGTTCAACC GGCTTTATAT TCAAAAAGAT
AGCAGCGAGA TTTCGGAAAA GACCGTTAAA AAGGTGGAGC GTTTCCTGAA AATGGGCGAT
TGCCCTGCGT GCAAAGGCGC GCGCCTGAAC GAGCGGGCAA TGGCATGCCG CATTAATGGG
CTGAATATCG CCGAAATGTC CGCTATGGAA GTGTCGGAAC TCGTTAAAAT CATCAGTGAA
ATCCATGATC CGGTCTCTAA ACCGATGATC GACACGCTCA CGGAGCGGCT GCAACATTTG
GTCGACATTG GCCTCGGTTA CCTGAGCCTC GACCGCGAAA CGGGCACATT ATCCGGCGGC
GAGTCGCAGC GGATCAAAAT GGTGAAGCAT TTGAACAGCA GCCTGATCGA CATAACTTAT
ATTTTCGACG AACCGAGCAT TGGTCTGCAC CCACGCGATG TGCACAGGCT CAATGAGTTA
TTGCAAAAAC TTCGCGATAA GGGTAACACT ATCCTGGTTG TGGAGCATGA TCCCGATGTG
ATCCGTGTAG CGGATTACGT GGTGGACGTT GGCCCGAAAG CCGGAAGCGG TGGGGGCGAA
ATCGTGTTTT CAGGGCATTA TGAAGGGTTG TTGAAAGCAG ATACGCTTAC CGGCCGCTTC
ATGAAGCGCG ATTTGAGGGT AAAATCCAGC TTCCGCCAGC CTACCGGCGC ATTGAAAGTG
AAGAATGCCA GGCGGCACAA CCTCAAAAAT GTGTCGGTTG ACATACCTAC CGGCGTTTTT
ACCGTGGTAA CCGGCGTGGC GGGTTCTGGA AAAAGCTCAC TCATCAATGG CGTGTTCCTT
TCGCAGCATC CCGAGGCGAT CGTGATCGAC CAGTCGGCAG TGGGCACGTC TATCCGCTCC
AACCCGGCCA CTTACACGGG TATCATGGAC GATATCCGCA AATTGTTCGG AAAAACGAAT
AAAGTGAGTG CGTCGCTGTT CAGCTTCAAC TCCGACGGCG CGTGCCCGGA ATGCCAGGGG
CTGGGTTTTA TTTTTACGGA CCTGGCGTTC CTTGAACCGG TGAAAACGGT TTGCGAAACC
TGCGAGGGGA AGCGTTTCAA ACAGGAGGTG CTGGAATACA AAGTGAATGG CAAATCGATC
ACGGATGTGC TGGATATGCC TGTGGAAGAG GCATTAAGCT TTTTTAAGGC CAAAGACGTG
GTGCATAAAC TGACGGCGAT GAACCAGGTA GGGCTGAACT ACCTCACGCT CGGGCAGCCG
CTGAGCACGT TGTCCGGCGG TGAATGCCAG CGGATCAAAC TGGCGGGGGA ACTGCACAAA
AACGGCACCA TTTACGTCAT GGACGAGCCT ACTACCGGCC TGCACATGTC GGACACCGGG
CATTTGCTGG AAATCATCGA CCATCTGGTA GATCAGGGCA ATTCCGTGAT CGTGATCGAA
CACAACACCG AGGTTATGAA ACACGCCGAC TGGATCATCG ACCTCGGCCC GGAAGGCGGG
CACAAGGGTG GACAAATACT GTTCGAAGGA ACACCGGCCG ACCTGCTCAA ATGCCGCGAG
TCGCTGACGG CCGAATACCT GCGCGGCGGT AATTAG
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| Protein sequence | MNQQEYIRIR GARENNLKNV SLDIPKRKIT IFTGVSGSGK SSIVFDTIGA EAQRQLNETF
SMFIRNRLPR ISQPEADAIE NLSTSIVIDQ KRLGGNSRST MGTITDISAV LRLLFSRLGK
PHAGFSNAFS FNDPAGMCLE CNGLGKKVEL DLEKFLDPTK SLNEGAILFP VFAVGTWYWK
AYTFSGMLDN DKKLEDYSDD EMHMLLYGKG TYESNYNGSV FETKYEGLVD KFNRLYIQKD
SSEISEKTVK KVERFLKMGD CPACKGARLN ERAMACRING LNIAEMSAME VSELVKIISE
IHDPVSKPMI DTLTERLQHL VDIGLGYLSL DRETGTLSGG ESQRIKMVKH LNSSLIDITY
IFDEPSIGLH PRDVHRLNEL LQKLRDKGNT ILVVEHDPDV IRVADYVVDV GPKAGSGGGE
IVFSGHYEGL LKADTLTGRF MKRDLRVKSS FRQPTGALKV KNARRHNLKN VSVDIPTGVF
TVVTGVAGSG KSSLINGVFL SQHPEAIVID QSAVGTSIRS NPATYTGIMD DIRKLFGKTN
KVSASLFSFN SDGACPECQG LGFIFTDLAF LEPVKTVCET CEGKRFKQEV LEYKVNGKSI
TDVLDMPVEE ALSFFKAKDV VHKLTAMNQV GLNYLTLGQP LSTLSGGECQ RIKLAGELHK
NGTIYVMDEP TTGLHMSDTG HLLEIIDHLV DQGNSVIVIE HNTEVMKHAD WIIDLGPEGG
HKGGQILFEG TPADLLKCRE SLTAEYLRGG N
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