Gene Dfer_1304 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_1304 
Symbol 
ID8224875 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp1532819 
End bp1534189 
Gene Length1371 bp 
Protein Length456 aa 
Translation table11 
GC content59% 
IMG OID644929165 
ProductFAD linked oxidase domain protein 
Protein accessionYP_003085717 
Protein GI255035096 
COG category[C] Energy production and conversion 
COG ID[COG0277] FAD/FMN-containing dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.0717469 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.684944 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAACAA AAAGTACTTC CATGACAGTC CCGCATTTCA GGGGCAGAAT CATCACCCCC 
GGCGATGCCG ATTATGAAAC CGCCAGGAAG GTCCACAACG GTATGGTGGA CAAATGCCCC
GCATTTATCG TCCGCTGTGC CGACGAGACG GACGTGCAGC AGGCCATCCG TTTCGCACGG
GATAACGACC TGCTCGTGGC CGTGCGCGGC GGTGGGCACA ACGGCGCCGG CCTCGGCGTA
TGTGACCAAG GGTTAGTCAT CGACCTGTCT GCGATGCGCA ATGTGACGGT TGATCCGCAG
GCCCGCACCG TACGGGCGCA GGGTGGCTGC CTGCTCGGCG ACCTCGACGC GGCCGCTCAT
CCGCACGGCC TGGCGGTGCC CACGGGGATC AATGCCACTA CCGGCATCGG CGGCCTCACG
CTCGGCGGCG GGCTGGGGCA TCTGACGCGC TTCGGCGGGC TTACGATCGA CAACCTCCTC
GAAGCCAATA TGGTACTGGC CAATGGCGAG ATAGTAAAGG CCTCAGTTAC CGAAAACGAG
GACCTGTTCT GGGCCATCCG CGGCGGCGGG GGAAATTTTG GCGTGGTAAC GTCCTTTCTT
TTCAGGGCGC ATGAGGTGCA CACGGTGTAC GGCGGGCCGA TGTTCTGGCA TATGGACGAC
GCGAAGGAGC TCATGGCGTG GTACCAGGAT TTTATCAAAC AGGCTCCCGA AAGTGTCGGC
GGTTTCTTTG CATTTCACAA AATACCCCCC GCACCCATGT TCCCCGAGCA ATACCACCTC
GAAACCATGT GCGGGATCGT ATGGTGCTGT GTGGATGAAG AAGAAGCGGC GGAGGTGTTC
GACATGGTGC GGGCATTCAG AAAACCGCTC ATAGACGCCG TGGGGCCATT ACCGGTGCCG
GCATTGCAAA CCATGTTCGA CGACCTTTTC GCGCCCGGAT TGTACTGGTA CTGGAAGGGC
GATTTTGTAA AACATCTCAG CCCGGAAGTG ATGGACGTGC ACATCAGGCA CGCACATAAA
ATCCCTAATT TTTTCTCGGG AATGCATCTG TACCCTGTAA ACGGCGCCGC CGGCCGCGTT
CCGAACGATG CCACCGCCTG GAACTACCGC GACGCCACGT GGTCGATGGT GATCGTGGGC
ATTTCACCCG ATCCGTCTGA AAAAGAGCTC GTCACCTCTT TCGCCCGCAA TTACTGGCAG
GAACTCCACC CTTACGGCGC CGGCGGCGCG TATGTCAATT TCATGATGGA TGAAGGCGCC
GACCGCGTGA AGGCCACTTA CGGCAGCAAC TATGAAAAGC TGGCGCGCAT CAAAGCCAAA
TACGACCCCG ATAACCTCTT CCGCGTGAAC CAGAATATCA AGCCCCAATA A
 
Protein sequence
METKSTSMTV PHFRGRIITP GDADYETARK VHNGMVDKCP AFIVRCADET DVQQAIRFAR 
DNDLLVAVRG GGHNGAGLGV CDQGLVIDLS AMRNVTVDPQ ARTVRAQGGC LLGDLDAAAH
PHGLAVPTGI NATTGIGGLT LGGGLGHLTR FGGLTIDNLL EANMVLANGE IVKASVTENE
DLFWAIRGGG GNFGVVTSFL FRAHEVHTVY GGPMFWHMDD AKELMAWYQD FIKQAPESVG
GFFAFHKIPP APMFPEQYHL ETMCGIVWCC VDEEEAAEVF DMVRAFRKPL IDAVGPLPVP
ALQTMFDDLF APGLYWYWKG DFVKHLSPEV MDVHIRHAHK IPNFFSGMHL YPVNGAAGRV
PNDATAWNYR DATWSMVIVG ISPDPSEKEL VTSFARNYWQ ELHPYGAGGA YVNFMMDEGA
DRVKATYGSN YEKLARIKAK YDPDNLFRVN QNIKPQ