Gene Dfer_1292 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_1292 
Symbol 
ID8224863 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp1522536 
End bp1522925 
Gene Length390 bp 
Protein Length129 aa 
Translation table11 
GC content57% 
IMG OID644929153 
Producttranscriptional regulator, HxlR family 
Protein accessionYP_003085705 
Protein GI255035084 
COG category[K] Transcription 
COG ID[COG1733] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.109042 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.938313 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGAAAAC AAAGCTCCAC GAACCTTGAA AACGAAATGC TGATCAACGG GAATTGCGAC 
ATGGCCTACA CGCTGGACCT CATCGGCGGG CGGTGGAAGC CCTCTATCCT GTGGCGGCTG
GCTAATGGCG CCATGCGGTA CAGCGACCTC CGCCGCAGCC TGCCGGCGGT TTCGGAACGC
ATCCTTATTT TGCAGCTGCG CGAAATGGAA AGCGACGGGC TCATCAGTCG TAAAGCGTAC
CCCGAAGTTC CGCCGCGTGT GGAATACCAG CTCACCGACC TCGGCAAAAG CCTCGAGCCG
GTTATAAACA TCCTCACCGA CTGGGGTGCT GAAAACCGGC CGGGTTCGGA CGGCAAAAGG
GTAAGTTGCG CGCAATTAAC AATTAAATAA
 
Protein sequence
MRKQSSTNLE NEMLINGNCD MAYTLDLIGG RWKPSILWRL ANGAMRYSDL RRSLPAVSER 
ILILQLREME SDGLISRKAY PEVPPRVEYQ LTDLGKSLEP VINILTDWGA ENRPGSDGKR
VSCAQLTIK