| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_1288 |
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| Symbol | |
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| ID | 8224859 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | + |
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| Start bp | 1517857 |
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| End bp | 1519800 |
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| Gene Length | 1944 bp |
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| Protein Length | 647 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 644929149 |
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| Product | peptidase M56 BlaR1 |
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| Protein accession | YP_003085701 |
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| Protein GI | 255035080 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG4219] Antirepressor regulating drug resistance, predicted signal transduction N-terminal membrane component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.778723 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.21473 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGGCAT TCCTGGATTA CCTGCTCAAA TTGTCGGTCA GCTTCGGTTT GATCGCGCTT
TTTTACCAGT TTGTGTTGCG CAAGCTCACT TTTTACAACG CCAACCGGCA TTATCTGCTG
CTGTACTCCG CACTTTGCTT TATCATTCCG CACATCAATA TTAACACGGT GATCGAACAA
GCACCAGCCA CGTTGCCGGC CCGCACGTTT GTCCAAAGCG TGCCCACGAT CACACAGGCG
CAGGCACCGG CGATCGTCGT GCCGCCGCCA GTGGCAGAAA GCCCCGCCGG CCCTACTCCT
ACCGACTGGA TTGCCATGCT CTGGATCTCC GGCATGGTGG TTATGGTTTC CAGGCTGTGC
ATGCACATCC GGTCCTACCG GCGCATTAAG GCGGAATCGT GGCTCGTGTC GGACGACGGC
GTGAGGATCT ACCATTTCGA CCTCGAAATC AGCCCGTTCT CCTTCGGAAA CTCCATTTTC
TATAATCCAA CCCTGCACCA GCCCGACGAA TTACAGGACA TGATCCTGCA CGAGTACATC
CACGTGCGGC AATGGCATTC GGTGGACGTG ATCTGGTCCG AAATCCTGTG CATCATCAAC
TGGTACAACC CGTTCGTGTG GCTCATCCGC AGCGCGATCC GGCAGAATCT CGAATACATT
GCCGATGAGA AAGTGCTCGA AAATCATCCG GATACCAAAG CATACCAGTA TTTATTGCTC
AAAACGGCCG TTGGTGCCGA GTTTTCGCTC GTCAACCAGT TCGGTTACCA TTCCCTGAAA
CAGCGGATTG TGATGATGAA CAAAAATGCT AGCCCGCGTA TATTGCTGGC GTGTTTCCTG
TTCACACTGC CGCTGCTGGC GGTGATGCTG GCGGCATTCA GGGTTGACCA ACCGAAACCA
GCGCCCGTGA AACGCATCTT CATGCGGCAA TGGCAGTCGG ACAAGAAAAC CGTGAGCAGC
CGGAAGCCCA AAGACCACAT TCACCTGGCG GGCCTCTTGT TCGACGCCTC GACCGGCAAG
CCGCTTGACC GCGAAATGCT CACTGTGACG CACGACGACC TTACCGTCAA AACGATCATG
ACCGACGAGG ACGGCTACTA CTTTGCGGAG GTGCCCGTCA AGATGGAAAA GGGGGTCATG
CATTCCTACG AGGTGAAATA CCTTAGCAAA GGCCGCGAGC GGTCGATTGC CGGCCAGACT
TACCAGCAAG ATTACGTCTG GGGCGACGGG TTTAATGTGA CCTTCCTCAC AACGCAAGGC
CCACCGGCTT CGCTGAGCAA CCACTACTAC ATTCCCACCA AGCCATTTTA CGACAAGTAC
GAGCCGCGGC GCGCCCGCTC CGAACTTAAA GCGTACTTAC TTCAAAACCT GCGTCCATTC
CGCGATGAGG TTGCGCTCAA AATGGATTTC CAGCGAACGC ACCGATTCCC GAAAGACGTG
ATCACACTCT ACAAAGGAGG TTATTTCGAC CGCAAAAAGG AGCTCGTCGG CTATGAAGGA
GAAACCAAAC TGTACCTGAA CGGCAAGGAA GTCACGCACC GCGAGGTGAA TGCGGCATTC
AAAAGCTACC CCTATATGCT CAGCTGGGAC CAGGAGCGCA GAGCGCCGTC GATGGTGGGC
ATCTGCACGC AGATCGTTTA CCTTACATGC CCGATCCACC GCGACGCCCC GCCAGCAGCC
CTCGTAAAAG GCAATGTAGA AGTGCTGGAC GCCCCATCCT TCGATCCCGG CAGGCTGCAA
ACCGAACCGT ATATGCTCGA CGGTTTCCGC CAGGTGTACG GTGCAAGCAG CAATCTGATG
CCTGAAAAGC ACGAAATCAA AAGGATTATG CTGCTCAAAG GCCGACTCGC CCGCTACTAC
GATCCGGCCC TCGACCGGAT TTGGTGGATC GAAACGCGGC CTGTGGCCGA AGTATTTGAG
CGGCCGGACT TCGCGCGGCG ATAA
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| Protein sequence | MSAFLDYLLK LSVSFGLIAL FYQFVLRKLT FYNANRHYLL LYSALCFIIP HININTVIEQ
APATLPARTF VQSVPTITQA QAPAIVVPPP VAESPAGPTP TDWIAMLWIS GMVVMVSRLC
MHIRSYRRIK AESWLVSDDG VRIYHFDLEI SPFSFGNSIF YNPTLHQPDE LQDMILHEYI
HVRQWHSVDV IWSEILCIIN WYNPFVWLIR SAIRQNLEYI ADEKVLENHP DTKAYQYLLL
KTAVGAEFSL VNQFGYHSLK QRIVMMNKNA SPRILLACFL FTLPLLAVML AAFRVDQPKP
APVKRIFMRQ WQSDKKTVSS RKPKDHIHLA GLLFDASTGK PLDREMLTVT HDDLTVKTIM
TDEDGYYFAE VPVKMEKGVM HSYEVKYLSK GRERSIAGQT YQQDYVWGDG FNVTFLTTQG
PPASLSNHYY IPTKPFYDKY EPRRARSELK AYLLQNLRPF RDEVALKMDF QRTHRFPKDV
ITLYKGGYFD RKKELVGYEG ETKLYLNGKE VTHREVNAAF KSYPYMLSWD QERRAPSMVG
ICTQIVYLTC PIHRDAPPAA LVKGNVEVLD APSFDPGRLQ TEPYMLDGFR QVYGASSNLM
PEKHEIKRIM LLKGRLARYY DPALDRIWWI ETRPVAEVFE RPDFARR
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