Gene Dfer_1287 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_1287 
Symbol 
ID8224858 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp1517479 
End bp1517838 
Gene Length360 bp 
Protein Length119 aa 
Translation table11 
GC content48% 
IMG OID644929148 
Producttranscriptional repressor, CopY family 
Protein accessionYP_003085700 
Protein GI255035079 
COG category[K] Transcription 
COG ID[COG3682] Predicted transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value0.58486 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.221741 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAAAAT TAACGACACA GGAGCAAGAC GCCATGCTGG CGGTATGGAA AACGGGAGAA 
GGCAGTGTGA AGTCGTTTAT GGAAGCAATG GCACCTCCCG CCCCACCCTA TACGACAGTC
GCTTCCACCA TCAAGAATCT CGAAAAGAAG GGCTACCTCA CCAGCCGGCT GATCGGCAAT
GCGTACCTCT ACGCCCCGGC GATCAGCGAA GAGGCTTATA AACAGAAGTT TATGGGAAGT
GTGGTGAAAG ATTATTTCGA AAATTCCTAC AAGGAACTGG TGAGTTTTTT CGCGCAGAAA
AACAAAATAT CGGCCGACGA ACTGCGGGAG ATTATCGGCA TTATAGAAGG TAAAAAGTAA
 
Protein sequence
MEKLTTQEQD AMLAVWKTGE GSVKSFMEAM APPAPPYTTV ASTIKNLEKK GYLTSRLIGN 
AYLYAPAISE EAYKQKFMGS VVKDYFENSY KELVSFFAQK NKISADELRE IIGIIEGKK