| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_1282 |
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| Symbol | |
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| ID | 8224853 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | + |
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| Start bp | 1511577 |
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| End bp | 1514135 |
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| Gene Length | 2559 bp |
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| Protein Length | 852 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 644929143 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_003085695 |
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| Protein GI | 255035074 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG4771] Outer membrane receptor for ferrienterochelin and colicins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.0691192 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.241515 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAATGC TAAGATTTCT CCTCGTTGTT TCCATCCTTG CCTGCTCACT CCTGTCACCG
GCATTTGCGC AATTTCCCGC CGCAGGAAGC AGCCAGCCCA AAGCCCTGCC CGGAACGGCC
GGCGACCAAA GCCCCAAGGG ATCGGCCAGA ATTACCGGTT CCATCGTTGA TTCCGCTTCA
TCCAAACCCA TCGAATTTGT TAGCATTGCA CTTTACGACA AGTCGAACAA CAAGGCCATT
GACGGAACGG TAGCCGATGA TAAGGGGAAA TTCGCGCTCA CCAAACTCGC TGCCGGCGAC
TACAAGATAC TCGTATCGTT CATTGGTTAT GCCAATAAAA CCGTCGACAA TATCAAGCTC
GGCAAAGGAC AGGACGTGGA TCTCGGGACG ATCAGCCTCG GCTCCAATAC CAAAACCCTG
AATGAGGTAA CGGTAACCGG ACAAGCCGCG TTGATCGAAG AGAAAGTTGA CCGCCTCGTT
TACAATGCCG AAAAGGACAT TACCGCCAAA GGTGGCGACG CTACCGACAT CCTGCGCAAA
GTTCCGCTCC TAACCGTTGA CCTGGACGGC AACGTATCGC TGCGCGGAAG CCAGAATATA
CGCGTGCTGA TCAACAACAA ACCCAGCACG ATCATCGCCA ACAGCGTAGC CGATGCATTG
AAACAAATCC CGGCCGACCA GATTAAGTCG GTAGAAGTGA TCACCAGCCC ATCAGCCAAA
TACGATGCAG AAGGCTCGGG CGGGATCATT AACATCATTA CCAAAAAGAA CTCCCTGCAA
GGTTTAAACC TGAATATCGA CGCGGGTGTC GGAAACCGTG GTTCCATGCT TGCACTCAAT
GGCGGCTACC GCAAGGGCAA AGCCGGTTTC ACGATCGGCG GCTTCGGACG AGGGATGTAC
AATACGGTAA CCAAAAGCAC ATTGGAACAA ACCAGCACCG TAGAGAACGT TACCACAACC
ACGCGCCAAA CCGGCGACGG TTCCAGCCAC GGCCTTTTCG GTAACTATAA CCTGGGTTTT
GATTACGACA TTTCCAAAAA CCAAAGCCTC ACGGCCGGTG TGAAATACGG CGTACGCAAT
TTCTCCAACC AGCAGGACCT CGCCACCCGA CTAATGAAAA CCGGCTCGAC GGATGTGCTT
TCAGCACGTA ATGTGGCTGC CGACAACCTT TCGGGAACGG TGGACGTGAA CGTCGATTAC
CTGCATACGT TCAAGCCGCA GCAGGAATGG AGCGTATCGA CGCTGTACAG CCGCAATGAC
CTGACCAATG ACTTCGACGC CGACATTTTT GACGATAAAA ACCTGAAAGC GCGCCAGCGG
AACCTGAACA AGAGCATTAA CCAGGAATTT ACGTTCCAAT CTGACTATCA GACACCTATT
AAGAAAAACC AGATGCTGGA ATTCGGTGGA AAAGGCATTT TCCGGGAAGT AAAAAGTAAA
TACAGCTTCC TCATCGCCGA ACCTACCGGC GACTACCGCC CCGAAACCGA CCAGCCTGCC
GGTGACCTGA CTTACCATCA GAACATTGCC GCGGCCTATT CGTCCTACAC TTATACGACT
AAAAAGCGCT ACACTTTCAA AGGCGGCTTG CGCTACGAAC ACACATTTAT CGACGCGGCC
ACGAACGAAG GTGTGGTGGG TGTGGGCAAT TACGGCGTGC TCGTGCCGAG TGTGAATGCA
TCCAAAACAT TTAAGGGAAC CACCGTGAAA CTGGGTTACA ACCGACGCAT CCAGCGCCCG
GGCTTGCAGC AGCTCAACCC CAACTTTAAC TCGGCCAACC CGCAGAACAT TACCGTCGGT
AACCCCGAAC TGCGCCCGGA ACTTACAAAC AACTACGAAC TCGGGCTGAG TAAGAACATC
AAGAAAACGT ATGTGAATGC TACATTCTTC GGTCGGTTCA CGAACAATGC GATCACGCAG
GTACGCCAGC CTTCGGATAC GCTCGCGGGC GCCATCGTGA CGACCTACGA GAACATCGGT
AAGCAGCATG CCTACGGCGC GAACATCTTC GCCAACATCG CCGCTACTTC CAAAATCAAC
TTCGGGATGT TCGCCAATGC ATTTTACACG AAGCTGACCG GCCAAACAGT CGGACAGGAC
GGGATTTCGC AGGAAATCGA CAACACCGGG GTGAATATCA GCGGTGGTTT GTTCTCGCAG
GCTACCTTCG GCAATGGCTG GGGCGCGCAG GCGTTCGGAT TCATGCAAGG TCAGCAGATC
CAGTTGCAGG GTAAGCAGGG CGGATTCGGG TTCTACACCG TCGGTGTGAA GAAGGAATTT
GCCAATAAAA AGGCCAGCCT CGGCCTCGCT GCGGAAAACT TCCTGAGCAA AAGATTTAAA
ATGCATACCG AATTGACTTC CTTGCAGTTC AACCAGGTCA ATGACATTTA TTTGTACAAC
CGCGGGTTCC GCCTCACATT CACCTACAAA ATAGGTAAAA TGACAATGGA CGCGCCGCGC
AGAAAAGCCA AATCCGTGAA CAATGACGAC GTGAAAAGCG AAGGCGGAGG CCAGCAGCAA
GGCGGTGGCG GCCAGGGCGG CGGAAACGCC CCTCGCTAA
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| Protein sequence | MKMLRFLLVV SILACSLLSP AFAQFPAAGS SQPKALPGTA GDQSPKGSAR ITGSIVDSAS
SKPIEFVSIA LYDKSNNKAI DGTVADDKGK FALTKLAAGD YKILVSFIGY ANKTVDNIKL
GKGQDVDLGT ISLGSNTKTL NEVTVTGQAA LIEEKVDRLV YNAEKDITAK GGDATDILRK
VPLLTVDLDG NVSLRGSQNI RVLINNKPST IIANSVADAL KQIPADQIKS VEVITSPSAK
YDAEGSGGII NIITKKNSLQ GLNLNIDAGV GNRGSMLALN GGYRKGKAGF TIGGFGRGMY
NTVTKSTLEQ TSTVENVTTT TRQTGDGSSH GLFGNYNLGF DYDISKNQSL TAGVKYGVRN
FSNQQDLATR LMKTGSTDVL SARNVAADNL SGTVDVNVDY LHTFKPQQEW SVSTLYSRND
LTNDFDADIF DDKNLKARQR NLNKSINQEF TFQSDYQTPI KKNQMLEFGG KGIFREVKSK
YSFLIAEPTG DYRPETDQPA GDLTYHQNIA AAYSSYTYTT KKRYTFKGGL RYEHTFIDAA
TNEGVVGVGN YGVLVPSVNA SKTFKGTTVK LGYNRRIQRP GLQQLNPNFN SANPQNITVG
NPELRPELTN NYELGLSKNI KKTYVNATFF GRFTNNAITQ VRQPSDTLAG AIVTTYENIG
KQHAYGANIF ANIAATSKIN FGMFANAFYT KLTGQTVGQD GISQEIDNTG VNISGGLFSQ
ATFGNGWGAQ AFGFMQGQQI QLQGKQGGFG FYTVGVKKEF ANKKASLGLA AENFLSKRFK
MHTELTSLQF NQVNDIYLYN RGFRLTFTYK IGKMTMDAPR RKAKSVNNDD VKSEGGGQQQ
GGGGQGGGNA PR
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