Gene Dfer_1259 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_1259 
Symbol 
ID8224830 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp1489603 
End bp1490940 
Gene Length1338 bp 
Protein Length445 aa 
Translation table11 
GC content54% 
IMG OID644929121 
Productmajor facilitator superfamily MFS_1 
Protein accessionYP_003085673 
Protein GI255035052 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.186094 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.385793 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAACCT TTTATGCGGT CCTCGCCAAC TCGCTCGCGG CCGCGCTCAC CAATACATTT 
GTCTGGTTCG CCGTCACGTT CTGGGTGTAT CTCGAAACCA AAAGCGTGCT CGCTACTTCC
GTGATGGCAG GCGTTTATCT GGCAACGGTG GCGGTTTCCG GCTTTTTCCT GGGTTCAATA
GTGGACCGTT ACCGGAAGAA AACATCTATG ACGATCTCAG CCACGATCAC ACTGGCGCTC
TACATTGTCG CACTCATCAT CTACGTCACC ACGCCCGAAG CTGTTTTCAA GGACGATTCG
AGCATTAACC TGTGGCTTTT TATTACACTC TGCCTGTTTG GGGCCATTAC CGGAAATATC
CGCACCATCG CACTATCGAC CGTCGTGACG ATCCTCATCG AAGAAGATCA CCGTGACAAG
GCCAATGGGA TGGTCGGAAC AGCGAATGGC GTTTCGTTCC TCGTCGCGTC CATTTTCAGC
GGTCTGGTGA TCGGCTATCT GGGTGTGCTG TGGATGATGG TGCTGGCGGT CGCACTTAGC
GTGCTGGTGC TCATTCACCT GCTTACGATC GACATCCCGG AGAAAGAAAT CGTCCATACC
GATTCGGGTA CCGAGCATAT CGACATTCGC GGCACTATTG CCGCCGTGGG CATGGTGCCG
GGCCTTTTCG GGTTGATTTT TTTCAATACA TTCAACAACT TCCTGGGCGG TGTATTTATG
TCGCTGATGG ACGCCTACGG ACTTTCGCTC GTGTCGGTGC AGGCGTGGGG CATACTTTGG
GGCATTCTGA GCCTTGGGTT TATCGTCGGC GGATTGGTCG TTGCGAAACG CGGGCTGGGC
AAGATGCCGT TGAAAACCCT CTTCGTGGCC AATATTATCA TGTGGGCGAT CTGCATCGTC
TTCCCGATCC AGGCATCGAT TATCCTGCTC GGCGTCGGTA TGTTCGTGTA CCTTTGCCTC
ATACCCGTCG TAGAAGCTAC CGAGCAAACC ATTTTACAGA AAGTCATCCC ACCCGAGCGG
CAAGGCCGTG TCTTTGGATT TGCACAAAGC ATTGAACAGG CCGCTTCGCC CATTACTGCA
TTTCTGATAG GTCCCATTGC CAAGTTCATA TTTATTCCTT TTATGACCAC CGGCGCCGGC
GTGCGGCTCA TTGGCGACTG GTTCGGCATC GGTACAGCCC GCGGACTGGC GCTGCTCTTT
ATCGTCACGG GCATCCTGGG ATTGATCGTC ACACTCGTAG CCATGCAGTC GGCCGCTTAC
AAAAGGCTGT CGCTGATCTA CAAAAAGCCT TCGCCGGAGT ACGACACCGA TAGCGTACCC
GTGCAGGAGC AGGCCTGA
 
Protein sequence
MKTFYAVLAN SLAAALTNTF VWFAVTFWVY LETKSVLATS VMAGVYLATV AVSGFFLGSI 
VDRYRKKTSM TISATITLAL YIVALIIYVT TPEAVFKDDS SINLWLFITL CLFGAITGNI
RTIALSTVVT ILIEEDHRDK ANGMVGTANG VSFLVASIFS GLVIGYLGVL WMMVLAVALS
VLVLIHLLTI DIPEKEIVHT DSGTEHIDIR GTIAAVGMVP GLFGLIFFNT FNNFLGGVFM
SLMDAYGLSL VSVQAWGILW GILSLGFIVG GLVVAKRGLG KMPLKTLFVA NIIMWAICIV
FPIQASIILL GVGMFVYLCL IPVVEATEQT ILQKVIPPER QGRVFGFAQS IEQAASPITA
FLIGPIAKFI FIPFMTTGAG VRLIGDWFGI GTARGLALLF IVTGILGLIV TLVAMQSAAY
KRLSLIYKKP SPEYDTDSVP VQEQA