Gene Dfer_1247 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_1247 
Symbol 
ID8224818 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp1477095 
End bp1478021 
Gene Length927 bp 
Protein Length308 aa 
Translation table11 
GC content52% 
IMG OID644929109 
Productriboflavin biosynthesis protein RibF 
Protein accessionYP_003085661 
Protein GI255035040 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0196] FAD synthase 
TIGRFAM ID[TIGR00083] riboflavin kinase/FMN adenylyltransferase 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.856402 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.320696 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACATTT ATCATAGCCT GGATTCCTTT GAAAAACTGG AATATGGCGT CGTAACCAGC 
GGCACTTTCG ACGGGGTGCA TCTGGGACAT CAGAAAATAC TGGCCCGTTT AAAAGAAATT
ACCGAGCAAT CGGGCGGCGA ATCGGTGGTG CTGACCTTCT GGCCGCACCC GCGCACGGTG
GTGTCGGAGG ATAGCCAGGA CCTGCAATTG CTTTCCACAA TCGAGGAAAA AATCGAACTG
TTTTCCAAAC TGGGCATTCA CCACCTCGCC ATTGTTCCCT TTACCCGCTC GTTTTCGGAA
CTGACTTCGG AAGAATTTAT CAAAGAAATT CTCGTTCAAA AGATCGGCAC GAAAAAGCTG
GTAATCGGTT ACGACCACCG TTTTGGCCGT AACCGCGAGG GGAGCTTTGA GTTTCTGCAA
AAGAACTGCT CGGAATATGG CTTTGAAGTG GAAGAAATAC CGAGAGAGGA CATTGAACAC
ACGGCCATCA GCTCGTCGCG CATCCGCAAA GCGCTGATTA CCGGGCATAT CCACGAAGCA
AACGAACTGT TGGGCCGGAA CTACGCCCTG TCGGGAACTG TGGTGAAAGG GAAACAACTC
GGCCGCACGA TCGGCTTCCC GACAGCCAAC CTGTATGTGC ACGAGGCGTA CAAACTCATT
CCGATGAATG GTGTGTACGT GATCAACGCC ATTCACCAGG GCCAGCGCTT CAAGGGAATG
CTCAACATCG GCGTGCGCCC CACCGTGGAC GGTACGGTGC GTACGATCGA AGCGCATCTA
TTCGACTTTG ACAAAGAGAT TTACGGCGAA GACCTTCAAC TGGAACTGCT GCATTACCTC
CGCCCCGAGC AGAAATTCGA CGGGCTCGAT ATGCTCGTAA GGCAGATCAA AATCGATCAG
GAAAACGCGC TCGCCTATTT TGGCTAA
 
Protein sequence
MNIYHSLDSF EKLEYGVVTS GTFDGVHLGH QKILARLKEI TEQSGGESVV LTFWPHPRTV 
VSEDSQDLQL LSTIEEKIEL FSKLGIHHLA IVPFTRSFSE LTSEEFIKEI LVQKIGTKKL
VIGYDHRFGR NREGSFEFLQ KNCSEYGFEV EEIPREDIEH TAISSSRIRK ALITGHIHEA
NELLGRNYAL SGTVVKGKQL GRTIGFPTAN LYVHEAYKLI PMNGVYVINA IHQGQRFKGM
LNIGVRPTVD GTVRTIEAHL FDFDKEIYGE DLQLELLHYL RPEQKFDGLD MLVRQIKIDQ
ENALAYFG