Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dfer_1231 |
Symbol | |
ID | 8224802 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dyadobacter fermentans DSM 18053 |
Kingdom | Bacteria |
Replicon accession | NC_013037 |
Strand | - |
Start bp | 1461638 |
End bp | 1463287 |
Gene Length | 1650 bp |
Protein Length | 549 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 644929093 |
Product | Glucose-6-phosphate isomerase |
Protein accession | YP_003085645 |
Protein GI | 255035024 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0166] Glucose-6-phosphate isomerase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 0.89106 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.000628963 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGCTATCAA ACGTCCCCTT TGATCAGTTG GCGGCTTATA AAAAGCTGAA AACGCATCAC AAAACCATCT CTCAGAAACA TCTGAAAACC CTTTTCGAGG AAGACGCCGA CCGCCATAAA AAATTCTCCA TTCGTTTTGG AGACATATTG CTGGATTACT CCAAAAACCG CATTACGTCA CGCACACGCT CATACCTCGT TCAGCTGGCC GAAGAAGCAG GCCTGGCCGA GGCGATTGAG GCGATGTTTA CCGGCGAGAA GATCAATGCG ACGGAAGACC GGGCTGTTTT GCACACCGCA TTGCGGAACC GTTCCAACGA ACCGGTGCTC GTGGATGGTA AGGATGTGAT GCCGGATGTG AATGAGGTGC TTGCGAAAAT GAAAGATTTT TCGACGCGCG TCAGATCTGG CTCGTGGAAG GGCTACACCG GTAAAGAAAT CACGGATATC GTGAATATCG GGATCGGTGG GAGCGACCTC GGCCCAGTAA TGGTAACCGA GGCGTTGAAA GCCTACGCTA AAAATGGCTT GAACGTCCAT TTCGTATCGA ACGTCGACGG TACCCACATC GCGGAAACGG TGAAGTCGCT CAATCCGGAG ACTACGCTGT TCATGATCGC TTCCAAAACT TTTACGACGC AGGAAACGAT GGCCAACGCG CACAGCGCTC GCAGCTGGTT CCTCGAAAAG GCGTCGAACG AGGAGCACGT GAAAAAGCAC TTCGTTGCCA TCTCGACCAA CCGCACGGAA GTCGAGAAAT TTGGTATCGA TCCTGAAAAC ATGTTCGGCT TCTGGGATTG GGTAGGAGGT CGCTACTCGC TGTGGTCGGC GATCGGTTTG TCGATTGCGT GCTATGTGGG CTTCCAGAAT TTTGAGCAGT TGCTCGCGGG CGCACACGAA ATGGACAAGC ATTTCCGCAC CACCAAGTTG GAACGCAACA TTCCCGTGAT CCTCGCATTG CTTGGAATCT GGTACAACGA TTTCTTCGAC GCGCAAACTC AGGCGATCCT GCCGTACGAT CAATACATGC ACCGTTTCGC CGCGTACTTC CAGCAGGGCG ATATGGAGAG CAATGGAAAA AGTACCGGTC GCGATGGTAA AGCGGTGGGT TACCAAACCG GTCCGGTGAT CTGGGGCGAG CCGGGCACCA ATGGGCAGCA CGCATTTTAC CAGCTGATCC ACCAGGGTAC GAAGCTGATC CCTTGTGATT TCATTGCACC GGCAGTAAGC CACAACCCGC TGGGTGATCA TCACAAAATG CTGTTATCCA ACTTCTTCGC TCAAACCGAA GCGTTGATGA ACGGCAAAAC CGACGAGGAA GTCCGTGCAG AATTGAAAGC TGCCAAAAAG AGCGATGCGG AGATCGAGCA AATTGCGCCG TTCAAAGTGT TCTCGGGTAA CCGACCGACC AACTCGCTCC TCGTGAAGAA AATCACTCCG AAAGTGTTGG GCAGCCTGAT CGCCATGTAC GAACACAAGA TTTTTGTACA AGGTATCATC TGGAACATTT ACAGCTTCGA CCAATGGGGG GTTGAGCTCG GCAAGCAACT GGCGAACAAA ATCTATCCGG AGTTGCAAAA CGACTGGCCG GTGACCAACC ACGACAGTTC TACCAATGGT TTGATCAACC AATACAAACG CTGGCGCTAA
|
Protein sequence | MLSNVPFDQL AAYKKLKTHH KTISQKHLKT LFEEDADRHK KFSIRFGDIL LDYSKNRITS RTRSYLVQLA EEAGLAEAIE AMFTGEKINA TEDRAVLHTA LRNRSNEPVL VDGKDVMPDV NEVLAKMKDF STRVRSGSWK GYTGKEITDI VNIGIGGSDL GPVMVTEALK AYAKNGLNVH FVSNVDGTHI AETVKSLNPE TTLFMIASKT FTTQETMANA HSARSWFLEK ASNEEHVKKH FVAISTNRTE VEKFGIDPEN MFGFWDWVGG RYSLWSAIGL SIACYVGFQN FEQLLAGAHE MDKHFRTTKL ERNIPVILAL LGIWYNDFFD AQTQAILPYD QYMHRFAAYF QQGDMESNGK STGRDGKAVG YQTGPVIWGE PGTNGQHAFY QLIHQGTKLI PCDFIAPAVS HNPLGDHHKM LLSNFFAQTE ALMNGKTDEE VRAELKAAKK SDAEIEQIAP FKVFSGNRPT NSLLVKKITP KVLGSLIAMY EHKIFVQGII WNIYSFDQWG VELGKQLANK IYPELQNDWP VTNHDSSTNG LINQYKRWR
|
| |