Gene Dfer_1231 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_1231 
Symbol 
ID8224802 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp1461638 
End bp1463287 
Gene Length1650 bp 
Protein Length549 aa 
Translation table11 
GC content52% 
IMG OID644929093 
ProductGlucose-6-phosphate isomerase 
Protein accessionYP_003085645 
Protein GI255035024 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0166] Glucose-6-phosphate isomerase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.89106 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000628963 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCTATCAA ACGTCCCCTT TGATCAGTTG GCGGCTTATA AAAAGCTGAA AACGCATCAC 
AAAACCATCT CTCAGAAACA TCTGAAAACC CTTTTCGAGG AAGACGCCGA CCGCCATAAA
AAATTCTCCA TTCGTTTTGG AGACATATTG CTGGATTACT CCAAAAACCG CATTACGTCA
CGCACACGCT CATACCTCGT TCAGCTGGCC GAAGAAGCAG GCCTGGCCGA GGCGATTGAG
GCGATGTTTA CCGGCGAGAA GATCAATGCG ACGGAAGACC GGGCTGTTTT GCACACCGCA
TTGCGGAACC GTTCCAACGA ACCGGTGCTC GTGGATGGTA AGGATGTGAT GCCGGATGTG
AATGAGGTGC TTGCGAAAAT GAAAGATTTT TCGACGCGCG TCAGATCTGG CTCGTGGAAG
GGCTACACCG GTAAAGAAAT CACGGATATC GTGAATATCG GGATCGGTGG GAGCGACCTC
GGCCCAGTAA TGGTAACCGA GGCGTTGAAA GCCTACGCTA AAAATGGCTT GAACGTCCAT
TTCGTATCGA ACGTCGACGG TACCCACATC GCGGAAACGG TGAAGTCGCT CAATCCGGAG
ACTACGCTGT TCATGATCGC TTCCAAAACT TTTACGACGC AGGAAACGAT GGCCAACGCG
CACAGCGCTC GCAGCTGGTT CCTCGAAAAG GCGTCGAACG AGGAGCACGT GAAAAAGCAC
TTCGTTGCCA TCTCGACCAA CCGCACGGAA GTCGAGAAAT TTGGTATCGA TCCTGAAAAC
ATGTTCGGCT TCTGGGATTG GGTAGGAGGT CGCTACTCGC TGTGGTCGGC GATCGGTTTG
TCGATTGCGT GCTATGTGGG CTTCCAGAAT TTTGAGCAGT TGCTCGCGGG CGCACACGAA
ATGGACAAGC ATTTCCGCAC CACCAAGTTG GAACGCAACA TTCCCGTGAT CCTCGCATTG
CTTGGAATCT GGTACAACGA TTTCTTCGAC GCGCAAACTC AGGCGATCCT GCCGTACGAT
CAATACATGC ACCGTTTCGC CGCGTACTTC CAGCAGGGCG ATATGGAGAG CAATGGAAAA
AGTACCGGTC GCGATGGTAA AGCGGTGGGT TACCAAACCG GTCCGGTGAT CTGGGGCGAG
CCGGGCACCA ATGGGCAGCA CGCATTTTAC CAGCTGATCC ACCAGGGTAC GAAGCTGATC
CCTTGTGATT TCATTGCACC GGCAGTAAGC CACAACCCGC TGGGTGATCA TCACAAAATG
CTGTTATCCA ACTTCTTCGC TCAAACCGAA GCGTTGATGA ACGGCAAAAC CGACGAGGAA
GTCCGTGCAG AATTGAAAGC TGCCAAAAAG AGCGATGCGG AGATCGAGCA AATTGCGCCG
TTCAAAGTGT TCTCGGGTAA CCGACCGACC AACTCGCTCC TCGTGAAGAA AATCACTCCG
AAAGTGTTGG GCAGCCTGAT CGCCATGTAC GAACACAAGA TTTTTGTACA AGGTATCATC
TGGAACATTT ACAGCTTCGA CCAATGGGGG GTTGAGCTCG GCAAGCAACT GGCGAACAAA
ATCTATCCGG AGTTGCAAAA CGACTGGCCG GTGACCAACC ACGACAGTTC TACCAATGGT
TTGATCAACC AATACAAACG CTGGCGCTAA
 
Protein sequence
MLSNVPFDQL AAYKKLKTHH KTISQKHLKT LFEEDADRHK KFSIRFGDIL LDYSKNRITS 
RTRSYLVQLA EEAGLAEAIE AMFTGEKINA TEDRAVLHTA LRNRSNEPVL VDGKDVMPDV
NEVLAKMKDF STRVRSGSWK GYTGKEITDI VNIGIGGSDL GPVMVTEALK AYAKNGLNVH
FVSNVDGTHI AETVKSLNPE TTLFMIASKT FTTQETMANA HSARSWFLEK ASNEEHVKKH
FVAISTNRTE VEKFGIDPEN MFGFWDWVGG RYSLWSAIGL SIACYVGFQN FEQLLAGAHE
MDKHFRTTKL ERNIPVILAL LGIWYNDFFD AQTQAILPYD QYMHRFAAYF QQGDMESNGK
STGRDGKAVG YQTGPVIWGE PGTNGQHAFY QLIHQGTKLI PCDFIAPAVS HNPLGDHHKM
LLSNFFAQTE ALMNGKTDEE VRAELKAAKK SDAEIEQIAP FKVFSGNRPT NSLLVKKITP
KVLGSLIAMY EHKIFVQGII WNIYSFDQWG VELGKQLANK IYPELQNDWP VTNHDSSTNG
LINQYKRWR