| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_1221 |
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| Symbol | thrS |
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| ID | 8224792 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | + |
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| Start bp | 1449128 |
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| End bp | 1451071 |
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| Gene Length | 1944 bp |
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| Protein Length | 647 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 644929083 |
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| Product | threonyl-tRNA synthetase |
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| Protein accession | YP_003085635 |
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| Protein GI | 255035014 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0441] Threonyl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00418] threonyl-tRNA synthetase |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.001104 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.00620187 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAAAGACG AGTCTCAAGT AAAAATTACC CTGCCCGACG GTAGCGAACG TTTTTACCCA
AAAGGGGTAA CCGCTCTCGA AATCGCGCTC AGTATCAGTG AAGGGCTTGC ACGGAATGTG
ATAGCCGCCA AAGTGAATAA CGAGGTCTGG GACCCTACGC GCCAGATCAC GGAAGACTCG
CTGGTGAAGC TGCTGACGTG GAACGACGAG GACGGTAAAG CTACGTTCTG GCACTCTTCG
GCCCACTTGC TGGCCGAGGC ATTGGAAGCG CTGTATCCGG GAATCAAGTT CGGTACGGGG
CCTTCGATCG AAAAGGGCTT TTACTATGAT GTAGACCTCG GCGGACAGAC CATTTCGCAG
GAAGATTTCC CGAAAATCGA AGCGAAAATG CTGGAACTGG CACGCCAGAA AAACGAATAT
ATCCGCAAGC CGATCAGCAA GGCCGAAGCC ATTGACTATT TTACCCAAAA AGGCGACGAG
TACAAGCTGG AACTGATCGA CGGGCTGGAA GACGGCTCCA TTACTTTGTA CGAGCAAGGC
AGTTTCACCG ACCTTTGCCG CGGGCCGCAC ATCCCGAATA CCGGCTTCAT TAAAGCCGCC
AAACTGACCA ACATCGCAGG TGCTTACTGG CGTAACAAGC AGGAAAACAA GATGTTGACC
CGCATTTACG GCATTACTTT TCCAAAACAA AAAGAACTGG AAGAGTATGT GACCCTGATG
GAAGAAGCTA AAAAGCGCGA TCACCGCCGC CTCGGCAAGG AATTGGAGCT TTTTGCATTC
TCTGAAAAAG TAGGACAAGG TTTGCCGTTG TGGCTGCCCA AAGGAGCGAT GCTGCGCGAG
CGCTTGCAGG CATTTTTGAG CAAGGCGCAG TCGCGGGCGG GTTATGTGCC TGTGATAACA
CCGCATATCG GCAGCAAGGA TTTGTACGTG ACCTCTGGCC ACTGGGATAA GTATGGCAAG
GACTCGTTCC AGCCCATTAA AACCCCGAAT CTGGATGAAG AGTACATGCT CAAACCGATG
AACTGCCCGC ACCACTGCGA GATTTACAAA ACGTCGCCAC GCTCCTACAA GGACCTGCCG
TTGCGCTTCT CAGAGTTTGG TACCGTTTAC CGTTACGAGC AGAGCGGTGA GCTGCACGGG
CTGACACGCG TACGCGGGTT CACACAGGAC GATGCGCACA TTTTCTGCCG TCCCGACCAG
GTAAAGGAAG AGTTTATCCG CGTGATCGAC CTTGTGCTGT ATGTGTTCAA ATCGCTTGGA
TTCAACGATT ATAGCGCACA AATCTCGTTG CGTGATCCTA ATAACAAGGA AAAGTACATT
GGTAAGGATG AGGACTGGGA AAAGGCTGAA AGCGCGATCA TCGAAGCAGC GGCCGAGCGC
GGCCTGAGCA CGGTAACCGA GCTGGGCGAG GCTGCATTCT ACGGTCCGAA GCTCGACTTC
ATGGTGCGTG ACGCATTGGG ACGCAAATGG CAGCTCGGAA CGATCCAGGT GGATTACCAG
CTTCCGCAGC GCTTCCAATT GGAATACACC GGCTCCGATA ACCAGAAACA CCGTCCGGTA
ATGATCCACC GTGCGCCGTT CGGTTCGATG GAACGCTTCA CGGCGATCCT GATCGAAAAC
ACTGCAGGCC AGTTCCCGCT GTGGCTTTCA CCGGACCAGA TTGCGATCCT GCCGATTTCG
GAAAAATTCG CCGATTATGC AGAAGAGGTG TTTTTCCAGT TGCAGGACCA CGATATCCGC
GGCTTTGTAG ATCACCGCGA CGAGAAGATC GGACGCAAAA TCCGCGATGC GGAAGTGACC
AAAGTGCCGT TCATGCTCAT TGTAGGTGAA AAGGAAGCCG CCGAAGGCAA GCTCTCCGTA
CGCCGCAAAG GTGAGGGAGA TTTAGGAAGT ATGACGATCG AAGAGTTCGC TGCCTTTTTC
AAAAAGGAAG CCAGCATTGC TTGA
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| Protein sequence | MKDESQVKIT LPDGSERFYP KGVTALEIAL SISEGLARNV IAAKVNNEVW DPTRQITEDS
LVKLLTWNDE DGKATFWHSS AHLLAEALEA LYPGIKFGTG PSIEKGFYYD VDLGGQTISQ
EDFPKIEAKM LELARQKNEY IRKPISKAEA IDYFTQKGDE YKLELIDGLE DGSITLYEQG
SFTDLCRGPH IPNTGFIKAA KLTNIAGAYW RNKQENKMLT RIYGITFPKQ KELEEYVTLM
EEAKKRDHRR LGKELELFAF SEKVGQGLPL WLPKGAMLRE RLQAFLSKAQ SRAGYVPVIT
PHIGSKDLYV TSGHWDKYGK DSFQPIKTPN LDEEYMLKPM NCPHHCEIYK TSPRSYKDLP
LRFSEFGTVY RYEQSGELHG LTRVRGFTQD DAHIFCRPDQ VKEEFIRVID LVLYVFKSLG
FNDYSAQISL RDPNNKEKYI GKDEDWEKAE SAIIEAAAER GLSTVTELGE AAFYGPKLDF
MVRDALGRKW QLGTIQVDYQ LPQRFQLEYT GSDNQKHRPV MIHRAPFGSM ERFTAILIEN
TAGQFPLWLS PDQIAILPIS EKFADYAEEV FFQLQDHDIR GFVDHRDEKI GRKIRDAEVT
KVPFMLIVGE KEAAEGKLSV RRKGEGDLGS MTIEEFAAFF KKEASIA
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