Gene Dfer_1204 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_1204 
Symbol 
ID8224775 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp1424590 
End bp1426938 
Gene Length2349 bp 
Protein Length782 aa 
Translation table11 
GC content55% 
IMG OID644929066 
Producthypothetical protein 
Protein accessionYP_003085618 
Protein GI255034997 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.980122 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCTCCT TTGCTTCCGG TCCGGAAGAT TTAAGCCTGA TGAATGCGGA AATCACAGAT 
TTATGCCTCG AAGCCGAAAA TTCTCCCAGC GACGCCCCGG TTACCGAAGA CCCCAATGCT
TCGAACGGGA AAACCCGCGG TGCCATCAAC AGCTGGGACT ACTACGTGGA ATACCATGCT
GATAACCTGG CGGCGGGCAA GTATTTGCTG ACGCTCCGCT ATTATGCCGA ACAAAATTCG
ACGGTAATGA TGTCGGTTAG TGCCGGCCCC CTCTCGCACG TGGAGCTGCC GGCTTCGCAT
TCCTGGAACA TTGCCTGGAA AGAACATACC ATCGAGGTGG ATTTGAATGC GGGGTTCAAC
CGAATTTTCA TCAGGGAGCT TCCGGGTTTC AATGTGCGGC AGGACAAAAT ATGTCTTACG
AAAAAAGATG TCAGCGGCGA ACCCGTTACC TGTAACTTTC AGGTGACGCC TTTTGCCGTT
GGCGCGCCTT ACGAACTGGG CGCCACCATG GCTTTGTACG CCAACTGCTC CGGGCCGGAT
TGCAATGGCG TTACTTATAC TTGGTCGGGC AACGGCATTT CCGGTGAAGG CAGCCCTATC
AGGCCATATA CTCCCTCATC GCCAGGAACT TATTTCTTTG ACGTTTCCGG ATCTAAAGAT
GGATGCTCGC CGCGGGGCGG ATCAGTGATG GTGGAGGTTA TCGACAAGCC GGATTGTAAT
TTCAGCGTTT CGGCGTCGGT GTCAGATGCC TCACCGAATT GTTCGGAGCC AATCACGCTA
AGTTCGCAGT GTTCGGGTCC CGATTGTGAC GGCATCAGGT ACAGCTGGGC CGGTGCGGGG
CTAAATGTAA CGGCAGCATC GGTGAATACA CCTGCACCTC CGGTGGGCGG ACTGTACAAC
TATACCGTGT ATGCTGCGAA AACCGGTTGT GTAACGAAGT CGGCAGAAGT AATGACCAAT
GTCAGCTGCG ATGCGAATCC AACTGAGCCG TTCAGCGCAT GCGTGGAAGC GGAGCATTCG
GACGGTAATG GCGCGATTAC CGACGACCCC AACGCCTCAA ACGGGCAAAC CCGCGGCACG
CAGCAAGATT CTTACTCATT TGTGAAATAT GTGATCAACG GCGTGAAAAA GACCGGCCCG
CACCAGGTAA CCCTTCGCTA TTACGCCCCG CAACCCGCAG GGATTTCGAT CTCTGTCAAC
AATGACATGA CCGTCCCGTC AACAGGCATC GCCGAATCAG GCTCCTGGAA CGTTGTCTGG
ACCGAGCATA CCTTCACATT AAACCTCAAA GAAGGCACCA ACACAATCCA GATCACAAGC
GGCTTCGGGC AGGGGCACGT CCGGCAGGAC AGGCTATGTG TGACGGGCCC GGGCGGAACG
GGAAACACGC CGAGCTGTGA TTTCAATGTC GAAGTCTACG CATCTACGCT TACTCCGGCC
TGCTCGACGT CCGTATTCGC CTCTGCGAGT TGCTCCGGCT TCGATTGCCA GTCGGTATCT
TACCAGTGGA GCGGCCAGGG AACCAGCTCC ACATTTTCAT CGGCCTCACT AAGCCTTCCG
CGGTCCAACG GCACCTACAC CTACACGCTC ACGGCCAGCA AAAACGCTTG CCCGCCGATT
GTCAAAACGC TGGACGTTAC CGTCAGCGGA TGCGACAATT CCGGGCCGTT CAGCGCCTGT
CTGGAATCGG AATGGGCGGC CGGCAATGGT CCCACCAGCA GTGATCCGAA CGCGTCGAAC
GGACAAACGA AAGGTGCCCA GAACAATTAT GATTATTATG TCGATTACTT CGTCGCGAAT
GTGCCTGCCA CAGGATTGTA CCCGGTAACA TTGCGCTATT ATGCCGAACC GAATGCGCAG
GTAAGCGTAG CGGTAAATGG AAGCATTGCG ATCCCGGCAT TACAGTTACC CCCCACTTAT
AGCTGGAATA TTGTTTGGCG TGAAGAAACA TTCTACGTCA ATTTGCCCGT CGGCAATAAC
ACAATCCGCA TTCAGGGCTT GCCGGGTGCG GCTACGCGCC AGGATAAGCT TTGCGTGGGA
AATGCGCAAA GCAATGTACG AATGGGCGCA CCGGAATCCT TTCAGCTGCC GGGAGATACA
CCGCTTCTGC AAGCATATCC GAACCCCGCT TCCGGTGAAT TTAAAGCGGT ATTTACCCTG
AAAACGGGAG AAACCGGCGC GATATCGGTA ACCGACGTCC AGGGCAAGAT TTGGCACACG
CGGAGCGTCG GGGGCGCGGG CACGCACGAG GAGCGCATTA CGCTCGACCG GGCGCCAGCG
GGCATTTACC TGCTGCAAGT GAAAAAGCCC GATTCAGTAG AAACTAAAAA GATATTGCTC
ACACGATAA
 
Protein sequence
MASFASGPED LSLMNAEITD LCLEAENSPS DAPVTEDPNA SNGKTRGAIN SWDYYVEYHA 
DNLAAGKYLL TLRYYAEQNS TVMMSVSAGP LSHVELPASH SWNIAWKEHT IEVDLNAGFN
RIFIRELPGF NVRQDKICLT KKDVSGEPVT CNFQVTPFAV GAPYELGATM ALYANCSGPD
CNGVTYTWSG NGISGEGSPI RPYTPSSPGT YFFDVSGSKD GCSPRGGSVM VEVIDKPDCN
FSVSASVSDA SPNCSEPITL SSQCSGPDCD GIRYSWAGAG LNVTAASVNT PAPPVGGLYN
YTVYAAKTGC VTKSAEVMTN VSCDANPTEP FSACVEAEHS DGNGAITDDP NASNGQTRGT
QQDSYSFVKY VINGVKKTGP HQVTLRYYAP QPAGISISVN NDMTVPSTGI AESGSWNVVW
TEHTFTLNLK EGTNTIQITS GFGQGHVRQD RLCVTGPGGT GNTPSCDFNV EVYASTLTPA
CSTSVFASAS CSGFDCQSVS YQWSGQGTSS TFSSASLSLP RSNGTYTYTL TASKNACPPI
VKTLDVTVSG CDNSGPFSAC LESEWAAGNG PTSSDPNASN GQTKGAQNNY DYYVDYFVAN
VPATGLYPVT LRYYAEPNAQ VSVAVNGSIA IPALQLPPTY SWNIVWREET FYVNLPVGNN
TIRIQGLPGA ATRQDKLCVG NAQSNVRMGA PESFQLPGDT PLLQAYPNPA SGEFKAVFTL
KTGETGAISV TDVQGKIWHT RSVGGAGTHE ERITLDRAPA GIYLLQVKKP DSVETKKILL
TR