| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_1191 |
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| Symbol | |
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| ID | 8224762 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | - |
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| Start bp | 1413620 |
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| End bp | 1415089 |
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| Gene Length | 1470 bp |
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| Protein Length | 489 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 644929053 |
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| Product | transcriptional regulator, GntR family with aminotransferase domain |
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| Protein accession | YP_003085605 |
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| Protein GI | 255034984 |
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| COG category | [E] Amino acid transport and metabolism
[K] Transcription |
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| COG ID | [COG1167] Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.419241 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.290751 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGAACG TGCTCTCTAC GCTGATTACG CCGGAGAAGG GAGGCAAGCA GCCGGTTTAT
ATCCAGATAG CCAATCAACT GATGGCGCTG ATCCGGGAAG GCACGCTGCA ATCGGGTTAC
CGGTTGCTGA GCACGCGCCA GCTCGCGGCG ATATTGAAGG TGCACCGGCG TACTGTGGTG
CAGGCTTATG ACGAGTTACT GGCGCAGGGT TGGCTGGAAA GTCAGACTGG AAACGGGACG
TTCGTTGCCC GAAACCTTCC GGACCTGCGG CCGCTCCCGC TCCCCGTTGC CGAAAAACCG
GAGCGCGACC CGTTGAAGAA GGCGGGTTTC CGGTTCGATC AGCCCGCGCA CCTCGACCGG
CCCGTGCTGA AAGCCGCATT CCGGCTGCAT CTGGATGACG GATTTCCCGA TCCGAGGCTT
GCACCGCGGG AAGATCTTTC TCGCGCTTAC CGCAGCCAGC TGCTGCACGG CTCTCCATAT
GTGCGGCTGG GCTACGGCGA AACCAGCGGC AGCAACTGGC TAAGGCAGGA GCTTTCGGCG
CATCTGAACG AAACGCGCGG ACTGAAAACA TCTCCGGCCA ACATACTCAT TGTGAGAGGA
ATGATAATGG GAATGTACCT GGCCGTGACG AGTTTGGTAA AGCCCGGCGA CTGTGTGGTG
ACCGATACGC CGGGCTGGTT CGGCGCGACG ATGAACTTCA TCCAGGCAGG CGCGCGCCCG
TGCCATGTGC CGGTGGATGA GTTTGGAATG GATGTAGATG CTTTGGAAGA ACTATGCTCG
AAGCAGCCGG TGAAGATGGT GTACGTGACC TCGCATCATC AGTACCCGAC CACCGTGGCG
CTCCGGCCTG ATCGCCGGAT CAAGCTCCTG CAACTCGCTG AAAAATATGG GTTCGTGATC
TTCGAAGACG ATTATGATTA TGATTTCCAT TATCTCAGCA AACCGCTGCT GCCGCTTTTC
GGCGCCGATC AGGCGGGAAT GGTGCTGTAT TGCGGCTCGT TCACCAAAAC TATTTCGCCT
GCATTCCGGA TCGGTTACCT GGTGGGGCCG GAGGACGTGA TCGCGCACCT GGCATCGCTG
AGGCGGATTA TAGACCGCCA GGGTGATGTA ATGCTGGAAA ATGCGATTGC CGAGCTGTTC
CAGACTGGTG TGATCCAGCG GCATTTGCGG AAATCGGTGC GGGTTTACAA GCAGCGCCGC
GATTTTTTCT GTGACTTGTT GCAATCGGAG CTTTCCGGTT CGGTCCGTTT TGAAGTGCCG
GATGGCGGAA TGGCCGTGTG GGCGCAATTC GATCCGGCTA TCGACATCCC GGCCCTTGCC
GAGCAGGCTG CTAAGAAGGA CTTATATATT TCAAATGGAA AAGCCGCGGG ATATCCGCCC
CAGTTCAGGA ATTATATTCG CCTTGGATTC GCTTCTTCGG ATCAGCACGA GCTTGAAGAA
TGCGTGCAGA TTTTGAAGCA ATTATTATGA
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| Protein sequence | MMNVLSTLIT PEKGGKQPVY IQIANQLMAL IREGTLQSGY RLLSTRQLAA ILKVHRRTVV
QAYDELLAQG WLESQTGNGT FVARNLPDLR PLPLPVAEKP ERDPLKKAGF RFDQPAHLDR
PVLKAAFRLH LDDGFPDPRL APREDLSRAY RSQLLHGSPY VRLGYGETSG SNWLRQELSA
HLNETRGLKT SPANILIVRG MIMGMYLAVT SLVKPGDCVV TDTPGWFGAT MNFIQAGARP
CHVPVDEFGM DVDALEELCS KQPVKMVYVT SHHQYPTTVA LRPDRRIKLL QLAEKYGFVI
FEDDYDYDFH YLSKPLLPLF GADQAGMVLY CGSFTKTISP AFRIGYLVGP EDVIAHLASL
RRIIDRQGDV MLENAIAELF QTGVIQRHLR KSVRVYKQRR DFFCDLLQSE LSGSVRFEVP
DGGMAVWAQF DPAIDIPALA EQAAKKDLYI SNGKAAGYPP QFRNYIRLGF ASSDQHELEE
CVQILKQLL
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