Gene Dfer_1174 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_1174 
Symbol 
ID8224745 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp1396555 
End bp1398036 
Gene Length1482 bp 
Protein Length493 aa 
Translation table11 
GC content50% 
IMG OID644929036 
ProductN-6 DNA methylase 
Protein accessionYP_003085588 
Protein GI255034967 
COG category[V] Defense mechanisms 
COG ID[COG0286] Type I restriction-modification system methyltransferase subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.0879909 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.322631 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTTCAC AAACCCGCAC GTATGCGCGC AAGAAATTGC TGGGCCAGGT TTATACGCCT 
TTTCATATTG TCGATAAGAT ACTCGGCCAT TGTGGCTTCT ACGAGGCCGA TTTAAGCGAA
AAACGCATGC TGGACCCGGC CTGCGGTAAC GGGCGTTTTC TCGTGCCTAT GGCGGAATTT
ATCATTCGTA ACACACCGCC CGACCGGGTC GCCGAAAGAT TGCAGCAACT ACATGGCTGG
GACGTCGATC GAAAAGCATT GCAACAATGC CGCGAAAATC TGGATGCACT AGTGGCGCCG
CTTGGCCTGG AAATAGACTG GAATTTGCGC AAATGTGATG CCTTGAAGCA ATGGCGGTCG
AAAGATAAGT TCGATCTGAT CATCGGGAAT CCTCCATATA TCCGCATTCA GCACTTGCCG
GAAACTCAGC GGAAGTACAT TCAAAAACAC TATTCATTTT GCAGTACCGG GTCCACGGAC
GCATTTATTG CGTTTTTTCA ACTCGCTACC AGGCTGCTCG CGCCGGACGG CCTGTGCGGT
ATGATTACGC CTAACTCCTT TCTCGTTTCC GAGTCGGGTG GGCCGCTGCG GAAGTATTTT
TATAAACACC AAAACTTGAA GCATATCACC AATTACCGGG ATATACCAGT TTTTGGGGCG
GCTTCGACCT ATCCTGCCAT TACCATTTTC GGCGGGCAAC AAGCAGATGC GTTCCGTTTC
GAGCAATGCC TCAACAACCG TTTCGAATAC CTCGGACGTG ACATCCGACA CACTGAATTG
CGGAACCATA TCCCGTGGCA GCTCTCCGTG GAGGCCCCGA AAGCGCTGAC AGGCCAGCGG
TTGGGTGATA TTTGCAAGAT CTCCGTCGGG TTGACTACGC TCGCCGATGG CTGCTACCTT
TTCAATATCA TCAGCGAGAA AAACGGTTTG GTGTATGCCA AAAACAAAAA CGGCTTCTTC
ACGCATTTGG AAAAGGATTT ACTCAAACCG ATCATCAAAG GCTCCAAACT GAAAGGTGCC
GACGACGCGG TGACTGAATA CATTCTGTTC CCTTACCAAA AAGACGATGC TGATAAACAG
CGCATTATCC CCGAAGAAAC GCTTAGAGCC GATTTTCCCC AAACATATTC CTACCTGCTT
AAAGTAAAAT CGGAGCTGGA CCGTCGTGAT AATGGCAAGC CCAATGCCGT TGCGTGGTAT
GCATTCGGGC GGGCGCAGGG GCTGGATAAT GCATTCGGCA AGAAGATCAT TTTCTCGCCC
ATCAACCGCG AGCCCAATTT CGTGCTGTAT GAAAACCCGG AAGTGACGGT GTATTCAGGG
TATTTCATCA AATACGATGG CGATTACCAA AAGCTGCTCG AACAGCTCAA TTCCCAGCGA
ATGGCCGATT TCGTCGCCAT CGCGGGCCGT GATTTTCAGG GCGGGTATAA AGGTTATAAC
AAAAAGGTAA TCGAGAATTT TATCGTTACC GGGCACGACT AA
 
Protein sequence
MASQTRTYAR KKLLGQVYTP FHIVDKILGH CGFYEADLSE KRMLDPACGN GRFLVPMAEF 
IIRNTPPDRV AERLQQLHGW DVDRKALQQC RENLDALVAP LGLEIDWNLR KCDALKQWRS
KDKFDLIIGN PPYIRIQHLP ETQRKYIQKH YSFCSTGSTD AFIAFFQLAT RLLAPDGLCG
MITPNSFLVS ESGGPLRKYF YKHQNLKHIT NYRDIPVFGA ASTYPAITIF GGQQADAFRF
EQCLNNRFEY LGRDIRHTEL RNHIPWQLSV EAPKALTGQR LGDICKISVG LTTLADGCYL
FNIISEKNGL VYAKNKNGFF THLEKDLLKP IIKGSKLKGA DDAVTEYILF PYQKDDADKQ
RIIPEETLRA DFPQTYSYLL KVKSELDRRD NGKPNAVAWY AFGRAQGLDN AFGKKIIFSP
INREPNFVLY ENPEVTVYSG YFIKYDGDYQ KLLEQLNSQR MADFVAIAGR DFQGGYKGYN
KKVIENFIVT GHD