| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_1161 |
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| Symbol | |
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| ID | 8224732 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | + |
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| Start bp | 1383801 |
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| End bp | 1384931 |
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| Gene Length | 1131 bp |
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| Protein Length | 376 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 644929023 |
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| Product | efflux transporter, RND family, MFP subunit |
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| Protein accession | YP_003085575 |
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| Protein GI | 255034954 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 0.444348 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.334679 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACATA TTCATCACAT CGCCATCACC GTGCTCGTTG CCAGTACCGT CCTGCAAAGC
TGCGGTTCGT CGCGGGCCGA AGAAGAAGAG CGCAAAAAGG CCGCTGCCGA AGCGAGCGCC
GAAGCACCCG CAGTGGACGC ATTCCCACTT AAAAAAGAGC AACTGGCATC GGACATCCAG
ATTCCAGGCG AACTGATCGC TTTCCAGCAC GTCGATATTT ATGCCAAAGT GAGCAGCTTT
GTCAAAAAAC TGCACGTGGA TGTGGGTACC GAGGTGCGGG AAGGCCAGTT GCTGGCCACA
ATGGAGGCTC CCGAGATTAC CTCCCAGCTC GTCACGAGCG AATCCCGGTT GAAATCGTTC
GAAGCCATTT ACCAGGCCAG TAAGGCCAAT TACGAACGTC TGCTCGAAAC CAGCAAAACG
CCAGGCACGG TGTCGCAAAA CGACCTGGAT GTGGCCCTGG CTAAGCAACG CTCCGATCTC
GCCCAGCTCG ACGCAGCGCG TTCGGCGAGC CGCGAAATCA CCGACACCCG CAATTACCTC
GAAATCCGGG CGCCATTCAG CGGCATTATC TCCGCGCGTA ATGTGAGCAC GGGCGCTTAC
GTGGGGCCGT CGGGCAAAGG CTCCGAATTT CCATTGTTCA CACTGGTGGA GCAGCGCAAG
TTGCGTTTGG TGGTGAGTGT GCCGGAGCAA TACACCAGCT ATCTCAAAAA TCAGAGCCAG
GTTTCGTTCA AAGTGAAGTC GCTGCCCAAC CAGCAGTTCC CGGCCAGAGT ATCGCGCCTC
GCGGGGGCGC TCGATACGCG ATTACGCTCG CAACGCACGG AAATGGATGT AATTAACAGT
GATAGAAAAC TTTTACCCGG TATGATCGCC GAAGTGACTA TTCCGCTGGC CGGCGACGCG
AATACTTTTG CCGTTCCCCG CTCGGCTGTG CTGAATTCTA CGCAAGGCAC TTATGTGATC
AAAGTAGTGG ATCGTCGTGC CGTATGGGTG CCGGTGAAAA CAGGCAGCAG CAGCTCGGAT
AAGACCGAAA TTTTCGGCGA TGTGAAGGAG GGTGATGTGC TTGTGAAAGT CGCTAATGAA
GAGATACGCG ACAATTCGGA TCTTAAAAAT GTGAAGCAGG CCGATATATA G
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| Protein sequence | MKHIHHIAIT VLVASTVLQS CGSSRAEEEE RKKAAAEASA EAPAVDAFPL KKEQLASDIQ
IPGELIAFQH VDIYAKVSSF VKKLHVDVGT EVREGQLLAT MEAPEITSQL VTSESRLKSF
EAIYQASKAN YERLLETSKT PGTVSQNDLD VALAKQRSDL AQLDAARSAS REITDTRNYL
EIRAPFSGII SARNVSTGAY VGPSGKGSEF PLFTLVEQRK LRLVVSVPEQ YTSYLKNQSQ
VSFKVKSLPN QQFPARVSRL AGALDTRLRS QRTEMDVINS DRKLLPGMIA EVTIPLAGDA
NTFAVPRSAV LNSTQGTYVI KVVDRRAVWV PVKTGSSSSD KTEIFGDVKE GDVLVKVANE
EIRDNSDLKN VKQADI
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