Gene Dfer_1155 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_1155 
Symbol 
ID8224726 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp1375549 
End bp1376430 
Gene Length882 bp 
Protein Length293 aa 
Translation table11 
GC content52% 
IMG OID644929017 
Productprotein of unknown function UPF0187 
Protein accessionYP_003085569 
Protein GI255034948 
COG category[S] Function unknown 
COG ID[COG3781] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.272335 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.253462 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCGACT ATAACCCCAA GGAGTGGTTA CGCTACATTT TCTATTTCCA GAAGGCGGAC 
ACCGTGCGCA AGCTCATGCC CATGATCCTC ACCATGGCCG CCTATTCGAG CGTGATCGCA
TACCTGATCA TCGTCCATTT CAGGATCACG GAGAACAACG ACCTGAAAAA CATTTCATTA
ATGCACTCGC TGCTCGGTTT TGTGATCTCG ATGCTGCTCG TGTTCCGGAC CAACACGGCG
TACGACCGCT GGTGGGAAGG CCGCAAGCAA TGGGGCATGC TGGTAAACGG GAGCCGCAAC
CTCGCGCTCA AACTGGCCGC GCTGATAGGC CCGGAATATG CCGACGAGCG TGAATTCTTC
AAAAAGATGA TCCCCAACTA CGCCTTCGCC ATGAAAAACC ACCTGCGGAA CAGGTACATT
TCGGAGGAGT TTGAAGATAC CAAGCTTTTT CAGAAATCAT CGCTGGTCAC CACCGACCAT
GTGCCCAACC AGATCGCCGC CGCGATATTT GCCAAAGTGA TAGAGCTGCA AAAAAGGGGC
GTATTGCTGC CCGAGCACAC CATTATCTTA AACCACGAGC TCGAAGGGTT TACCAACATC
TGCGGTGCCT GCGAGCGGAT CAAGAACACG CCTATCCCGC TTTCTTACAG CTCGTTTATC
AAGAAATTCA TCTTTATTTA CTGCCTCACG CTGCCGATCG GGTACGTGTT CAGCCTGCAT
TTCCTCGTCA TTCCGTTCGT GATGTTCGTG TTTTACATCC TCGCGAGCCT CGAAGTAATC
GCCGAGGAAA TTGAAGATCC GTTCGGCGAA GACAGTAACG ATTTGCCGAT GGAACGCATC
AGCGCGGGCA TCCGTACTGC CACGCAGGCG CTTCTAAAAT GA
 
Protein sequence
MIDYNPKEWL RYIFYFQKAD TVRKLMPMIL TMAAYSSVIA YLIIVHFRIT ENNDLKNISL 
MHSLLGFVIS MLLVFRTNTA YDRWWEGRKQ WGMLVNGSRN LALKLAALIG PEYADEREFF
KKMIPNYAFA MKNHLRNRYI SEEFEDTKLF QKSSLVTTDH VPNQIAAAIF AKVIELQKRG
VLLPEHTIIL NHELEGFTNI CGACERIKNT PIPLSYSSFI KKFIFIYCLT LPIGYVFSLH
FLVIPFVMFV FYILASLEVI AEEIEDPFGE DSNDLPMERI SAGIRTATQA LLK