Gene Dfer_1146 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_1146 
Symbol 
ID8224717 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp1363593 
End bp1364363 
Gene Length771 bp 
Protein Length256 aa 
Translation table11 
GC content51% 
IMG OID644929008 
ProductMethyltransferase type 11 
Protein accessionYP_003085560 
Protein GI255034939 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2226] Methylase involved in ubiquinone/menaquinone biosynthesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.00784878 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAAATCCA TCATTAGTTT AGTTCTGCGC TACATCCCGC GACCTTACCT CCAACTTGTC 
GGACACTGGG CTGCGCGGTT ACTCAGCATC TTCTATACCG GCAGCAAAGT GGAATGCCCG
GTTTGCAACA GCAAATACCG GAAGTTCCTC CCCTATGGCC GTAATACATC GAGCCGCGAG
AATGCGCTGT GCCCCAGCTG CTTGTCGCTC GAACGCCACC GGCTCATGGC GCTGTATATG
AAGCGCAGAA CCAATTTTTA CACCGCTAAC CTGAAAGTCC TGCACGTAGC ACCCGAATAC
TGTTTCATCG ACCGTTTCGA GCAGATGAAA AACCTGGATT ACATTACCGC CGACATCGAA
TCGCCCCTCG CGAAGGTGAA AATGGACATT CACCAGATCC CATTCGAAGC CAATACCTTC
GACGTCGCCA TTTGCAATCA CGTCATGGAG CACGTAGATG ACTATATTCT CGCCATGAGC
GAACTTCACC GCGTCCTCAA ACCGGGCGGC TGGGCATTGA TCCAATCCCC GCAGGACATG
AAATACGAAG TAACCTACGA AGACCCGACG ATCACCGATC CCAAAGAACG CGAAATCCAT
TTCCTCCAAA ACGACCACCT GCGCCTCTTC GGCCGTAACT ACGGCAAAGA GCTCGAAAAA
GGTGGTTTCA AGGTAACGGA AGACCGTTTT GTAATGGATG AATTGACAAA AGCAGAAGTG
CAGCGGTATT CGTTGCCTGG GGAAGAGATT GTTTATTTCT GCCAGAAGTA A
 
Protein sequence
MKSIISLVLR YIPRPYLQLV GHWAARLLSI FYTGSKVECP VCNSKYRKFL PYGRNTSSRE 
NALCPSCLSL ERHRLMALYM KRRTNFYTAN LKVLHVAPEY CFIDRFEQMK NLDYITADIE
SPLAKVKMDI HQIPFEANTF DVAICNHVME HVDDYILAMS ELHRVLKPGG WALIQSPQDM
KYEVTYEDPT ITDPKEREIH FLQNDHLRLF GRNYGKELEK GGFKVTEDRF VMDELTKAEV
QRYSLPGEEI VYFCQK