| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_1125 |
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| Symbol | |
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| ID | 8224696 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | + |
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| Start bp | 1339592 |
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| End bp | 1340143 |
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| Gene Length | 552 bp |
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| Protein Length | 183 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 644928987 |
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| Product | RNA polymerase, sigma-24 subunit, ECF subfamily |
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| Protein accession | YP_003085539 |
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| Protein GI | 255034918 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.0000000000233125 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.587181 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | TTGAATACCC TGACCGACAA TTCGCTGATG CTCCGGGTGA AATCCGGGGA CCTGGATAAG
ATGGGCTTGC TCTTTGAGCG GTACAACCGG CCGCTGTTCG GATTCTTTTA CCACATGACG
CACAAAAGCG ACCTCAGCGA GGACCTCGTG CAAAATGTGT TTTACAGAAT GCTAAAATAC
CGGCATACGT TTACGGGCGA CGGTGAATTC CGGACGTGGA TGTACCACCT GGCGAGGAAT
GTCCTCAACG ATTCAGTGAA ACAAAACAGG TCGTTCAATT TCTATGATGT GAACGAAGTC
GCCGACCGGC TGGGCGGCGG GATGCCGGCC GACGAAAACC TGGAACGCCA GCAGGATAAG
GATTTTTTGC ACGAAGCCAT GGGCGCACTA AGTCCGGAAT ACCGGGAAGT GCTGATTTTG
AGCCGGTTTC AGGAAATGAA ATACGACGAG ATCGCCAAAG TGCTCAACAT TAACGAAGGA
ACCGTGAAAG TGAGGGTTCA CCGGGCATTG GGAGAATTGA AGAAGAGGTT TTTTACAAAT
GAAAGACGAT AA
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| Protein sequence | MNTLTDNSLM LRVKSGDLDK MGLLFERYNR PLFGFFYHMT HKSDLSEDLV QNVFYRMLKY
RHTFTGDGEF RTWMYHLARN VLNDSVKQNR SFNFYDVNEV ADRLGGGMPA DENLERQQDK
DFLHEAMGAL SPEYREVLIL SRFQEMKYDE IAKVLNINEG TVKVRVHRAL GELKKRFFTN
ERR
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