| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_1120 |
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| Symbol | |
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| ID | 8224691 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | + |
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| Start bp | 1334623 |
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| End bp | 1337058 |
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| Gene Length | 2436 bp |
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| Protein Length | 811 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 644928982 |
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| Product | protein of unknown function DUF214 |
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| Protein accession | YP_003085534 |
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| Protein GI | 255034913 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0577] ABC-type antimicrobial peptide transport system, permease component |
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| TIGRFAM ID | [TIGR03434] Acidobacterial duplicated orphan permease |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.00406203 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.905875 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGAAAA ACTATTTCAC TATCGCGTGG CGAAACCTGG CCCGGAACCG GGTGTTTTCG
GCCATCAACA TTACCGGGCT GGCCATTGGG CTGGCCTCGT GTATGCTGAT CAGCCTGTAC
GTTATCGATG AGCTGAGTTT TGACCGCTTC CATGAGAAGT CCGGCCGGAT TGTCCGGACC
ACTTTTAAGG GCACGATGGC GGGCGGGATT ATCAACGAGT CGCACGCTAT GCCGCCCACC
GCGGGCGCAT TGAAGGCCGA TTACCCCGAA GTGCTCGAAG CGACAAGGCT CCGGCAGAGC
GGCAAACCGC TGGTTTTACA CAACAACCGC ATTTACAATG ACGAGAAACT GGCATTTGTG
GATTCCAATT TCTTTTCGGT TTTTACATTG CCTTTCATTC AGGGAAATCC TAAAACTGCT
CTGCTCGAAC CCAACACCAT TGTTTTGTCG GAAACTGCCG CGCGGAAATA CTTTGGTAAA
ACGGATGTAA CGGGGCAGAT TATCACTTTT AAAGATTGGA ACAAAACCCT GCGCGTGACC
GGCGTGATGA AGGATATTCC GTCCAATTCG CATTTCCGGT TCGATCTCCT CGGTTCGATG
GCCACGCTCG ACGAAGCCAG GTCGACTTCC TGGCTCACTT CTGAGTTTTT CACTTACCTC
GTGCTGCCGG AGGGTTATGA TTACAAAAAG CTGGAAGCCA AACTCCCCGC CACCGTCGAT
AAATACATTA GTCCTCAATT GAAACAGTCG ATGGGTGTAA CAATCGCCGA ATTCCGCAAG
CAGGGCAACA ACCTCGAACT ACGGCTTCAA CCATTGACCG ACATTCACCT GCATTCCGAT
TTTCAGTACG ACCTCGACGT GAACGGCGAC ATTACCTACG TGTATATATT TGGTGCTGTG
GCGGTTATGA TGCTACTGAT CGCCTGCATC AACTTCATGA ACCTGTCCAC GGCAGGATCG
TCCCGCCGGG CGCGGGAAGT GGGCGTACGA AAAGTAATGG GCTCGGAAAA ATCCGAACTT
GTGCGGCAAT TCCTCATCGA GTCGATCCTG CTGACATCCA TTGCGATGGT ACTTGCCATT
TTGTTCGCCG TGATCGGTTT GCCGGTTTTC AATGAATTAT CGGGTAAAAA TCTGTCGCTG
CAATGGGACG CTGTGCCGGG ACTGATTCCT GCGACGTTAG GCTTCGGGAT TTTGGTGGGC
ATTCTTGCGG GCAGTTATCC TGCATTCTTC CTGTCGTCGT TCAAGCCCAT TGCCGTGCTG
AAAGGCGGGG CGGCGGCCAT CCGGCTTTCA TCGTCCGGGC GCAGTATCAA CCTTCGCAGC
GGGTTGGTTG TATTTCAGTT TGCGATGTCG ATCGTCCTTA TCGCGGGAAC TACCGTAGTG
TTTCAACAAT TGCAGTTTAT CCGGAATAAA AAATTGGGAT ACAACAAAGA TCAGGTGATC
GTGGTGCCGG TTTGGTCGCT GGGCAAAAAC GTGGAAGCAT TCCGGGAGGC GCTCACGAAG
GACTCGCGCG TGGAACGCGT AAGCTTGTCG GGCTATGTGC CTGCGGGGCC TTCGGACAAC
AACAATTTCA CCGTCAACCC GGACGGAAAA ACGGACCGGA TGGTAAAAAC ACTCCGCTAT
GACGTCGACT ACGACTACAT TCCTACGCTG GGCATGACCA TCGCCCACGG CCGCAACTTT
TCGAGGGAAT ACGGCACCGA TTCCTCGGGC ATTATCATCA ATGAAACCGC CGTTAAAACC
TTCGGCTGGA CGCCCGAGAA TGCGATGAAC CGGCTCATTA CCCGCAACGA TAACGACGGC
AAGAAAACCA CATTCCGCGT GATCGGCATT GTGAAGGACT TCCATTTCAG GTCGATGCAC
GAACAAATCG GCCCGCTGGT GATGACGCTC AGCAGCGGCT GGGGCTGGAT GATGGTTAAA
ACGCGCAGTA AGGATGTTTC ACCGCTGCTT GCTGCGATGA AAAGCAATTG GAACAGCTTT
CAATACGACA TGCCGTTCAG TTACACTTTC CTGGATGAGC GTTTTAACGA AACTTACAAA
GCGGAGCAAA AAACCGGTCA GATCCTCGCC ACTTTCGCCG GGCTCACCAT TTTTGTCGCC
TGCCTCGGGC TATTCGGCCT CGCCACATTC ACCGCCGAAC AGCGCACGAA AGAAATCGGC
GTGCGGAAGG TGCTCGGCGC ATCGGTGGCA GGCATTATCG CATTGCTTTC CAGGGACTTC
CTGAAACTGG TGATCATCGC ATTGCTCATC GCTACGCCCG CCGCTTGGTG GCTGATGGAC
CGGTGGTTGC AGGAATTTGC CTATAAAGTC GACGTTTCCT GGTGGATATT TGCGCTGGCA
GGCGTACTGG CCGTGGTAGT GGCGCTGTGC ACGATTTCTT ATCAGTCGGT GAAGGCTGCG
CTGATGAACC CCGTGCAGTC CCTTCGATCA GAATAG
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| Protein sequence | MLKNYFTIAW RNLARNRVFS AINITGLAIG LASCMLISLY VIDELSFDRF HEKSGRIVRT
TFKGTMAGGI INESHAMPPT AGALKADYPE VLEATRLRQS GKPLVLHNNR IYNDEKLAFV
DSNFFSVFTL PFIQGNPKTA LLEPNTIVLS ETAARKYFGK TDVTGQIITF KDWNKTLRVT
GVMKDIPSNS HFRFDLLGSM ATLDEARSTS WLTSEFFTYL VLPEGYDYKK LEAKLPATVD
KYISPQLKQS MGVTIAEFRK QGNNLELRLQ PLTDIHLHSD FQYDLDVNGD ITYVYIFGAV
AVMMLLIACI NFMNLSTAGS SRRAREVGVR KVMGSEKSEL VRQFLIESIL LTSIAMVLAI
LFAVIGLPVF NELSGKNLSL QWDAVPGLIP ATLGFGILVG ILAGSYPAFF LSSFKPIAVL
KGGAAAIRLS SSGRSINLRS GLVVFQFAMS IVLIAGTTVV FQQLQFIRNK KLGYNKDQVI
VVPVWSLGKN VEAFREALTK DSRVERVSLS GYVPAGPSDN NNFTVNPDGK TDRMVKTLRY
DVDYDYIPTL GMTIAHGRNF SREYGTDSSG IIINETAVKT FGWTPENAMN RLITRNDNDG
KKTTFRVIGI VKDFHFRSMH EQIGPLVMTL SSGWGWMMVK TRSKDVSPLL AAMKSNWNSF
QYDMPFSYTF LDERFNETYK AEQKTGQILA TFAGLTIFVA CLGLFGLATF TAEQRTKEIG
VRKVLGASVA GIIALLSRDF LKLVIIALLI ATPAAWWLMD RWLQEFAYKV DVSWWIFALA
GVLAVVVALC TISYQSVKAA LMNPVQSLRS E
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