| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_1106 |
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| Symbol | |
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| ID | 8224677 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | + |
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| Start bp | 1317917 |
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| End bp | 1319401 |
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| Gene Length | 1485 bp |
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| Protein Length | 494 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 644928968 |
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| Product | Mandelate racemase/muconate lactonizing protein |
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| Protein accession | YP_003085520 |
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| Protein GI | 255034899 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[R] General function prediction only |
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| COG ID | [COG4948] L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 0.940832 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.271044 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAACA TCTTAAAACA AATCATCGAT TCAAACAAAC AAGTAGAAAC AGCCGAAAAA
GCGGCGGCAG CAGCGGAAAT CGCGAACCCA TCCACCAAAG ACAGCCGCCG GAACTTCCTG
CGCAAAACGG CCGTGGGCGG TATTGCGTTA GGCGGTTTTA TGTCGATGTC AACCGAGGAT
ACCATTGCGC AGGCAACGTC CAAGGTGAGC CGTGCTTCGA AGCCTTCGGA ATTGAAAATC
ACCGATTTGC GGTATTGCAT CGTCCAGAAT GTAGGTCGTA CGCCCATTAT CCGCATCGAC
ACCAACCAGG GCATTTACGG CCTGGGCGAG GTGCGCGACG GTGCCGACGA GCGGTATGCA
TTGTTTTTGA AAAGCCATTT GCTGGGACAA AATCCATGCA ATGTGGAGCA GCTGTTCAAA
TCGATCAAGC AGTTTGGCTA CCACGGTCGC CAGGCTGGGG GCGTTTGCGG GGTAGAAATG
GCGCTTTGGG ACCTTTGCGG CAAAGCCTAC GGCGTGCCCT GCTGGCAGCT GCTCGGCGGT
CGCTACCGCG ATAAAGTGCG TTTGTACGCG GATACGCCGG AGTCGAACGA CATCAATGAG
TTTAAGCAAA AAATCAAATT CCGTACGCAG GATCAGGGCT ATACCTGGCT CAAAATGGAT
ATTTCGATCG GTATGCTGCG TAATAGCGAA GGCGGTGTCG TGAACAACAA GTTCTGGGGC
GGCGGCTTCT CGCAATGGGC GGGCGATTAC CATTCCTATG CCAACACCAA ACACCCTTTC
ACCGCAATCC AGATCACGCC GAAAGGCCTC GATGAAATGG CGAAAGTTGT AGAAGACGTG
CGCAGCGTGA TCGGCTACGA AATTCCGCTT TCTTCCGACC ACTACGGCCA CTTTGACCTC
AACAACGGTA TCCGCCTCGG AAAAGCGCTC GACAAATATC GCCTGGCGTG GTTCGAGGAC
ATGGTGCCCT GGGAATATAC CGACCAATGG AAAACCATTT CGGACGCATT GGAAACACCT
ACCCTCACCG GCGAGGACAT TTACCTCAAA GAGGGTTTCA AGGCATTGAT CGAGCAGCGC
GCGGTGGACA TTGTGCACCC TGACCTGGCA TCGTCGGGCG GCTTGCTGGA AACGAAACGC
ATTGGCGACT ACGCCGAGGA CCACGGCATT GCGATGGCGA TGCACTTCGC GGGCACGCCG
GTGAGCTTCA TGGCCAATGT GCATTGCGCA GCAGCCACGC AGAACTTCCT CGCATTGGAA
CACCATTCGG TGGACGTGCC GTGGTGGGAA AGCCTGGTGA AAACCACCGA CGGCCGCAAG
CTCATCGACA AGGGCTATGC CGTGGTGCCG CTGGAAGCGC CGGGCCTGGG CATCGAGCTG
AACGAGGAGG AGGTGAAAAA GCACCTGCAT CCGAAAGACA AATCGTTCTT CGCGCCGACG
CCCGACTGGA ACGATAAACG CTCGCACGAC CGCCTGTGGA GCTAA
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| Protein sequence | MKNILKQIID SNKQVETAEK AAAAAEIANP STKDSRRNFL RKTAVGGIAL GGFMSMSTED
TIAQATSKVS RASKPSELKI TDLRYCIVQN VGRTPIIRID TNQGIYGLGE VRDGADERYA
LFLKSHLLGQ NPCNVEQLFK SIKQFGYHGR QAGGVCGVEM ALWDLCGKAY GVPCWQLLGG
RYRDKVRLYA DTPESNDINE FKQKIKFRTQ DQGYTWLKMD ISIGMLRNSE GGVVNNKFWG
GGFSQWAGDY HSYANTKHPF TAIQITPKGL DEMAKVVEDV RSVIGYEIPL SSDHYGHFDL
NNGIRLGKAL DKYRLAWFED MVPWEYTDQW KTISDALETP TLTGEDIYLK EGFKALIEQR
AVDIVHPDLA SSGGLLETKR IGDYAEDHGI AMAMHFAGTP VSFMANVHCA AATQNFLALE
HHSVDVPWWE SLVKTTDGRK LIDKGYAVVP LEAPGLGIEL NEEEVKKHLH PKDKSFFAPT
PDWNDKRSHD RLWS
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