| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_1099 |
|---|
| Symbol | |
|---|
| ID | 8224670 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dyadobacter fermentans DSM 18053 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013037 |
|---|
| Strand | + |
|---|
| Start bp | 1305289 |
|---|
| End bp | 1307028 |
|---|
| Gene Length | 1740 bp |
|---|
| Protein Length | 579 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 644928961 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003085513 |
|---|
| Protein GI | 255034892 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 0.699009 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 0.558006 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCATCAAT TGTTTCAGAA AGTCTCCCTG CTGTTGCTGG CCTGCCCGGT GATGGTAATG
GGCCAGACAG CGAAGGGAAA TTATTCTCCG CTTCCCCTCA AAGACCTCAG CGCATTTGAA
AGCGCTGCCC CCAACTGGTC GATACAAGGT GGCATTTCCA TACACCCCTC AGGGGCGGCA
AAGCCCAAAA CACTTGCCGG CGACGGCGTT CTCATCGGAA ATGCGGGCAC GGTGCTCACT
ACCAAACTGA AAGCAAGCGA TCTGCGGCTT TATGTGGAAT TTAACGTGGC GCCGGGGGCC
GAGGGTAATA TCATTCTCCC GGGCGGACAA AAAATCAAAA TCTCCGATAG CAGCAAGCAA
AAAGTAGCCA ACGCTTCCAC ATCCGGGTAC ATTGGCCAGT TTCCCAGCCA GAATGCCGCC
AAGTCTCCGG GCCTCTGGCA AACGCTTGAA ATCTCCTATG ATGCATCTGT ACAACATATT
CCTAACTCCG CGCGCCTGAA CACGCTTTCG CTCAACGGCG TCACAGTACT TGAAACGGTT
TACCTCCCCA ACACCAAAGC AGCCGTAGAC GGCCAGCCGA TTGCATTGGA GGTTACCAAA
GGCAGCATTG CTTTCCGGAA CGTTGGCTAC CAGCTTCTTG CTAATCGTAA GCCATTGTCA
ATCAACAATC TGCAATACAA AGTTTACTCT GATAAATGGG ATGCCAAAGA ATATAGCAAG
CTCGATCATG AAGGGCAGTC GCCCGTGCTA ACGCAGGAAG TGACCAACGG CATGCGCGAA
TTCCACCTGG TGTACGAAGG CGACATCGAC GTGACCGAGG CGGGCGATTA CATTTTCACG
ACCATTTATT CGGGTCCCGT TCTTTCGGTT GACATCGACG GCAAAAGTGT GGTATCGTCC
GGCGAAGCCA CTTCGCAGGA AACGCACACC GGTTCCATTA ACCTCACACA AGGCAAGCAC
AAATTCAAAA TCCATTACTC GCGCTTTCCC TGGCGCCAGC CTGCATTGGG GCTGCGCGTA
GAGAAATCGG GCGTGCGCCC TTACGACCTG CACACGCTGT CGTCGCTTCC CGAGCCCGAG
CCGAAGCCGT ACATCAGCGT GACGCCCGAA ATGCGCCCTG AAATGGTGCG GTCGTTCATC
CAGGTGGAAG GCGAGAAATC AAAACGCACG CATTGTATTT CGGTGGGAAG CCCCGACGGC
TGGAACTACA CCGTGGACCT GAACCGCGGC GCGCTGGTTC AGGCATGGCG AGGACAATTC
GCCGACGTGA CCGAAATGTG GTACGAGCGC GGTGAACCGC AGCTCCTTTT CCCGGCAGGA
CTGAAAGTGC ACGTGTCAGG CCGCAGTAGC GTGGCAATGC TCGATAATGC CAATGCAGCA
TGGCCAGATT CTTCCAATAT CAACTTCCTC GGTTATAAAA TCGATCAGAA AGGCTATCCC
GTGTTCCGCT ACGCAGTCGG ATCGGCCACG GTGAGCGATG AGCTCGTTTC CGGCGGCAAC
ACGCTCTCGC GCACATTCCG CGTGGAAGGC CGCCTGGAAG GCTCCCCTAC CGGTTCGCTA
TATTCCCTGC TGGCCAGCGG CAAGCAGATC ACCGAAATTG AAAAAGGACT TTACCAGATC
GACGACCGCT TTTATGTACA GGTTGATAAA AAGGCCAAAG CGATTGTCCG CCCGGCTGGC
GAAATGAAGG AGCTGATCCT TCCGGTTTCC AATGCCACCA GCTATTCCAT GTTTTGGTAA
|
|---|
| Protein sequence | MHQLFQKVSL LLLACPVMVM GQTAKGNYSP LPLKDLSAFE SAAPNWSIQG GISIHPSGAA
KPKTLAGDGV LIGNAGTVLT TKLKASDLRL YVEFNVAPGA EGNIILPGGQ KIKISDSSKQ
KVANASTSGY IGQFPSQNAA KSPGLWQTLE ISYDASVQHI PNSARLNTLS LNGVTVLETV
YLPNTKAAVD GQPIALEVTK GSIAFRNVGY QLLANRKPLS INNLQYKVYS DKWDAKEYSK
LDHEGQSPVL TQEVTNGMRE FHLVYEGDID VTEAGDYIFT TIYSGPVLSV DIDGKSVVSS
GEATSQETHT GSINLTQGKH KFKIHYSRFP WRQPALGLRV EKSGVRPYDL HTLSSLPEPE
PKPYISVTPE MRPEMVRSFI QVEGEKSKRT HCISVGSPDG WNYTVDLNRG ALVQAWRGQF
ADVTEMWYER GEPQLLFPAG LKVHVSGRSS VAMLDNANAA WPDSSNINFL GYKIDQKGYP
VFRYAVGSAT VSDELVSGGN TLSRTFRVEG RLEGSPTGSL YSLLASGKQI TEIEKGLYQI
DDRFYVQVDK KAKAIVRPAG EMKELILPVS NATSYSMFW
|
|---|
| |