Gene Dfer_1090 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_1090 
Symbol 
ID8224661 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp1289295 
End bp1289732 
Gene Length438 bp 
Protein Length145 aa 
Translation table11 
GC content48% 
IMG OID644928952 
Producthypothetical protein 
Protein accessionYP_003085504 
Protein GI255034883 
COG category[S] Function unknown 
COG ID[COG4731] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.177825 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.714021 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATAAAAA TACTTTTTAC TATATTTTTT TTAGCGGGAT TTGCGCCGGC AGGGTCGCAG 
ATTATCGTAG CTGACAGGAT CATTGGTGAG TGGATCAATG AAGAGAAAGA TACCCGGATC
GAGATCTATA AGGAAGGCGA AGAATATTTC GGACGGCTGC TCTGGTCGGA GGACCTGTAT
GAAGCCGATG GAAAAACTTC CCGCAAGGAT GTCCGTAACA CAAATGAAAA ACTGCGGGGC
AGAAACCTGC TTCATGTGAA CCTGCTAAAC AACTTCGTTT TTAGCGAAGA CCTTTGGGAC
GACGGCAAAA TGTACGACCC GAAGAGTGGC AAGACTTACC ATTGCCTCAT TCGATTGCGG
CAGGAAAAAA TGGAAGTCCG CAGCTACGTC GGCTTTCCAT TGCTCGGCAG GAGCACCTAT
TGGGACCGCG CCCGCTAA
 
Protein sequence
MIKILFTIFF LAGFAPAGSQ IIVADRIIGE WINEEKDTRI EIYKEGEEYF GRLLWSEDLY 
EADGKTSRKD VRNTNEKLRG RNLLHVNLLN NFVFSEDLWD DGKMYDPKSG KTYHCLIRLR
QEKMEVRSYV GFPLLGRSTY WDRAR