| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_1088 |
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| Symbol | |
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| ID | 8224659 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | - |
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| Start bp | 1286250 |
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| End bp | 1287482 |
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| Gene Length | 1233 bp |
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| Protein Length | 410 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 644928950 |
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| Product | Fmu (Sun) domain protein |
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| Protein accession | YP_003085502 |
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| Protein GI | 255034881 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0144] tRNA and rRNA cytosine-C5-methylases |
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| TIGRFAM ID | [TIGR00563] ribosomal RNA small subunit methyltransferase RsmB |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.263918 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.824497 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGAAACTAC ATAAAGGACT TGTTGCGGCT AGTGTCGAGG CATTGCAGGA TATTTTTATC
AAAAACCGGC AAGCGGACCG CGTGGTTGAA CAGCTATTGA AATCCAACAA AAAGTGGGGT
GCCCGCGATC GTGCCTTCAT TGCCGAGAAT GTGTACGGCA TCGTCCGCTG GTGGCGGCTG
GTGAAATATG CTGCGCAGAT AGACAAAGCT GTCGAAAGCG ATGATTTTTG GCGGATTATG
GGCGTGTGGC AGCTCATCCG GCCGGTGCAT CTGGATGGCC TTGAAGCACC CGACAGCCTC
CCAGAATGGC CGGAGTTCGT CCCTATCAAT GCTGAAATAG TCTTCGAGCG ATACCGCGAG
GGATTGAACA CCCGCAAGAT CGCCCAATCC ATTCCCGACT GGATCGATGA AACAGGCGCG
GCCGAACTAG GAGCCGCTTG GGACGCCGAA CTCGCGGCGC TGAACCATAC CGCGCCGGTT
GTCCTGCGGG TGAATACCCT GAAAACCGAT GTGTCAACAG TCAGAGAATT GCTTGGAGCG
GACATTGCCG AGCCTGTTCC TAGCGTACCC GAAGCGCTTG TTCTGAAAAA GCGCCTGAAC
GTTTCCGGGC TCGACAGCTT TAAGAGTGGC TTTTTTGAGG TCCAGGACGC TGGTTCACAA
TGGATCGCTC CCTATCTGGA TATTCGTGAG GGCATGTCGG TAATCGATGC GTGCGCCGGG
GCGGGCGGGA AATCCCTGCA TTTGGCGGCT TTGCTGGGCA ATACCGGCTC CATTCTCGCA
ATGGACATCG AACACCATAA ATTACAGGAA CTGGAACGCC GCGCAGCCCG AAACGGCGTC
ACCAACCTTT CGACAATGCT GATCAATTCC GATAAAATCA TTGAAAACCT TGCAGAAACG
ACCGACCGGC TTCTACTCGA CGTCCCTTGC TCGGGGCTTG GTGTGCTGAG GCGGAATCCG
GACAGCAAAT GGAAGCTAAA ACCCGAATTT CTGGACAAAA TCCGCAAGGT ACAGGCCCAG
ATTCTGGAAA ATTATTCGAA AATGGTTAAA AAGGGAGGTA AGATGGTGTA TGCCACGTGC
AGCATTCTGC CTTCCGAATC AGAAGAGCAA GTAAGGTCGT TCATGAAGCG GCATCAGGCC
GACTGGAACT TCGTGTCCGA ACACCGGTCA TCGCCTGCGC GCGACGGTTT CGACGGCTTC
TATATGGCCT TGCTGGAACG CAAAGGTGCG TGA
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| Protein sequence | MKLHKGLVAA SVEALQDIFI KNRQADRVVE QLLKSNKKWG ARDRAFIAEN VYGIVRWWRL
VKYAAQIDKA VESDDFWRIM GVWQLIRPVH LDGLEAPDSL PEWPEFVPIN AEIVFERYRE
GLNTRKIAQS IPDWIDETGA AELGAAWDAE LAALNHTAPV VLRVNTLKTD VSTVRELLGA
DIAEPVPSVP EALVLKKRLN VSGLDSFKSG FFEVQDAGSQ WIAPYLDIRE GMSVIDACAG
AGGKSLHLAA LLGNTGSILA MDIEHHKLQE LERRAARNGV TNLSTMLINS DKIIENLAET
TDRLLLDVPC SGLGVLRRNP DSKWKLKPEF LDKIRKVQAQ ILENYSKMVK KGGKMVYATC
SILPSESEEQ VRSFMKRHQA DWNFVSEHRS SPARDGFDGF YMALLERKGA
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