Gene Dfer_1082 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_1082 
Symbol 
ID8224653 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp1280485 
End bp1281729 
Gene Length1245 bp 
Protein Length414 aa 
Translation table11 
GC content54% 
IMG OID644928944 
Productphosphate-selective porin O and P 
Protein accessionYP_003085496 
Protein GI255034875 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.630817 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACCTTG TGGACACTAC AAACCAGATG GGAAAAGGAA TGCTATCGAT CTACGAACGT 
TATAACCGGG TGAGAATCAG CGGTTATATT CAGCCGCAGT TCCAGGTTAT TTCCAAAGAG
GGCGCAGAAA CATACGCAGG AGGGAATTTC TCGGGGCTTT CCAATAACCG CTTCATGCTC
CGGCGCGGGC GCCTTCGCGT GGACTATGCC CACCTGAACA AAAACAATGA TCCGACTTCC
TATTTCGTAT TTCAGTTTGA CGGCACCGAA CGCGGCGTGG CCATCCGCGA CTTCTGGGGA
AGGTTTTATG AAAACAAGTT CAAGATTTTT GCATTGACTA CCGGGATGTT CGCTCGGCCA
TTCGGACATG AAGTGAACCT GTCGTCGGCC AACCGCGAAA CGCCCGAACG CGGGCGCATG
TCGCAGATCC TGATGCGAAC CGAGCGCGAC ATTGGTGCGA TGCTTACCGT AGCCAGCCGC
AAATCGGACC TGTGGCACCA GAAGCTCAAA TTCGACATCG GGGTGTTTAA CGGACAGGGA
ATGTCCGGAC CGATGGATTA CGACAGCCAC AAGGACGTGG TCAGCCGCCT GAGTATGAAA
CCGACCAAGA TCCGCGCGCT GGGTAATGCC ACGCTCTCCG CGGCCATGTC GGGCTACGCG
GGCGGCATTG TGAGCCAGGG CAACATATTA TATAAAACCG AAAGACTGGG CAGCGAATAC
CAGGTCGTGC GGGACTCGTC GGCTTCTAAC CTGCACAAAG TAAGGCCTCG CAACTATGCC
GGTGCCGATT TCCAGCTCGC TTTCCCGAAC CGGAAGGGCG AAACGGAGTT CCGTGCGGAA
TACATTAAAG GACAACAAAC GGCGACGTTC GGCACGAGCG AAACGCCCGG CACGTACCCG
ACCACCAACG GCGTGAAAGA TCCGCTCTAC ACCCGCAGCT TCGATGGTGC CTATTTCTAT
TATCTCCAGC ACCTCGGCAG CCTGGACCAT CAGTTCATCA TGAAATACGA CTGGTATGAT
CCCAACACCA AGGTTTCGGG CCGGGAAATT TCGGCAGACA ATGGGTTCGG AAAGGCTGAT
CTGAAATATA ACACGCTGGG AATGGGCTAT GTATACATGG CCAACGAGTC GCTGAAATTC
GTTTTTTACT ACGAGTTTGT GCGTAATGAA AAGTCGTCGC TTGCCGGTTA CGAAAGCGAC
GTTTCCGACG ACGTATTCAC TGCGCGCGTC CAATACAACT TCTAG
 
Protein sequence
MDLVDTTNQM GKGMLSIYER YNRVRISGYI QPQFQVISKE GAETYAGGNF SGLSNNRFML 
RRGRLRVDYA HLNKNNDPTS YFVFQFDGTE RGVAIRDFWG RFYENKFKIF ALTTGMFARP
FGHEVNLSSA NRETPERGRM SQILMRTERD IGAMLTVASR KSDLWHQKLK FDIGVFNGQG
MSGPMDYDSH KDVVSRLSMK PTKIRALGNA TLSAAMSGYA GGIVSQGNIL YKTERLGSEY
QVVRDSSASN LHKVRPRNYA GADFQLAFPN RKGETEFRAE YIKGQQTATF GTSETPGTYP
TTNGVKDPLY TRSFDGAYFY YLQHLGSLDH QFIMKYDWYD PNTKVSGREI SADNGFGKAD
LKYNTLGMGY VYMANESLKF VFYYEFVRNE KSSLAGYESD VSDDVFTARV QYNF