Gene Dfer_1067 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_1067 
Symbol 
ID8224638 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp1263759 
End bp1264274 
Gene Length516 bp 
Protein Length171 aa 
Translation table11 
GC content52% 
IMG OID644928929 
Productpeptidylprolyl isomerase (FKBP-type peptidyl- prolyl cis-trans isomerase) 
Protein accessionYP_003085481 
Protein GI255034860 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1047] FKBP-type peptidyl-prolyl cis-trans isomerases 2 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.14963 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGTCG AAAAAAATAA CGTCGTAGCG TTAACATATA GCCTCAGCAT TCCGGACTCG 
GAAGGCGAAA CGGATGTGGT GGAAGTGGTA ACTGAAAACG ATCCCATGTA TTTCATCCAC
GGTATCAGCG GCCTTCCCGA AGGCTTCGAA AATCAGATCG AAGGCCTCGC TGCCGGCGAC
ACTTTCGATT TCACGGTAGC GCCCGAAGAA GGTTATGGTG AATATGACGA AGAGGCGGTT
GTAGACCTGC CGAAATCGGT GTTCCAAAAC AGTGAGGTAG ATCAAAACGA GCTGCTCCAA
GTAGGGAACA TCATCCCGAT GACCAACGAA GACGGCGAGC GCCTGCACGG CCAGATCGTC
GAAATCCAAG ACGAAGTCGT AATCATGAAC TTCAACCACC CGCTTGCAGG CAAGGAGATG
CATTTTTCAG GCAAAATCCT CAGCATCCGC GCAGCAACAG CAGAAGAGCT CGATCACGGC
CATGTGCACG GTACGGGCGG AGTGCATCAT CATTGA
 
Protein sequence
MKVEKNNVVA LTYSLSIPDS EGETDVVEVV TENDPMYFIH GISGLPEGFE NQIEGLAAGD 
TFDFTVAPEE GYGEYDEEAV VDLPKSVFQN SEVDQNELLQ VGNIIPMTNE DGERLHGQIV
EIQDEVVIMN FNHPLAGKEM HFSGKILSIR AATAEELDHG HVHGTGGVHH H