Gene Dfer_1065 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_1065 
Symbol 
ID8224636 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp1261981 
End bp1263000 
Gene Length1020 bp 
Protein Length339 aa 
Translation table11 
GC content52% 
IMG OID644928927 
ProductDNA polymerase III, delta subunit 
Protein accessionYP_003085479 
Protein GI255034858 
COG category[L] Replication, recombination and repair 
COG ID[COG1466] DNA polymerase III, delta subunit 
TIGRFAM ID[TIGR01128] DNA polymerase III, delta subunit 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.251286 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCACAAA CACCCGATAT CATTCTCAAA GAGCTGAGAA GCAAGAAGTT CCGGCCGCTC 
TATTTTCTGC ATGGCGACGA GCCCTATTAC ATTGATGCGA TTGCGGAAGA GCTTGAAAAC
AAGGTCGTTC CGGAATCGGA GCGCGGTTTT AACCAATTTG TGCTTTACGG GAAGGACACG
GATATGGCCG GTGTGCTGAG CTACGCGCGC CGTTTTCCGT TCATGGCAGA GCGGCAGCTC
GTGCTCGTGA AAGAAGCGCA CCGGCTCAAT GGCATTGAGC AGAAGGAACA ACAGCAGCGC
CTGGAAGATT ATGCATTGAA CCCGGTGCCG AGCACCGTGC TGGTTTTTTG CTATCATGCC
AATGCGGACG AGCGCAAGTC GTACCTGAAA GCCTGCAATG CGAACGGCGT GGTGGTGCAG
TCCAAGAAGA TGTATGACAA CAAGTTACCC GACTGGGTGG CTTCCTTTTG TCAGCATGAA
GGTGTAAAAA TCAGTCCGAA AGCGGTGCAA ATGCTGGTGG ACAACATTGG AAATGACTTG
AAACGCCTTT CGAACGAGAT CCGTAAAATT ATGGTAAATC TGCGGGTGGA TGAGGGCATC
GACGCCTCGG CGATCGAGAA ATTCGTCGGC ATCAGCAAGG AATACAATGT GTTCGAATTC
CAGAAAGCGC TCATGCATCG CGACGTGCTG AAAGCGAACC AGATAGCCGC ATTTTTTGCC
TCTAATCCCA AAGACAACCC GCTGGCCCCG GTGTTGATCA TTCTTTTCGG GTTCTTTTCA
AAATTGCTCC TTACGCATGC CGCTCGCGAT AAGTCGGAGA AGGGCCTGGC TGCCGAGCTG
GGGGTCAATC CTTATTTCGT TAAAGATTAT CTGCTGGCTG CGCGTAATTA TCCGATGGGA
AAGGTCGCCG ACGTGATCCA TTACCTGCGC GAATGTGACG GACGCCTGAA AGGGCTCGAC
GGCAACAGTG TGCCCGAAGG CGAGCTGCTG CGCGAGCTTG TTTTCAAAAT CGTGCATTGA
 
Protein sequence
MAQTPDIILK ELRSKKFRPL YFLHGDEPYY IDAIAEELEN KVVPESERGF NQFVLYGKDT 
DMAGVLSYAR RFPFMAERQL VLVKEAHRLN GIEQKEQQQR LEDYALNPVP STVLVFCYHA
NADERKSYLK ACNANGVVVQ SKKMYDNKLP DWVASFCQHE GVKISPKAVQ MLVDNIGNDL
KRLSNEIRKI MVNLRVDEGI DASAIEKFVG ISKEYNVFEF QKALMHRDVL KANQIAAFFA
SNPKDNPLAP VLIILFGFFS KLLLTHAARD KSEKGLAAEL GVNPYFVKDY LLAARNYPMG
KVADVIHYLR ECDGRLKGLD GNSVPEGELL RELVFKIVH