Gene Dfer_1062 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_1062 
Symbol 
ID8224633 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp1260038 
End bp1260739 
Gene Length702 bp 
Protein Length233 aa 
Translation table11 
GC content51% 
IMG OID644928924 
Producthypothetical protein 
Protein accessionYP_003085476 
Protein GI255034855 
COG category[S] Function unknown 
COG ID[COG3826] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.474404 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCAATT TGGAAGACCT TGACTGGGCG GATGTACGGG ATAACCTGCA CCGGCGTGGC 
TATGCGCGGC TGACGGGGGT TTTGAATGCG GAAGAATGCG ACGACCTCGT TTCCGCCTAC
GACGATTCGA CGCATTATCG CAAAACGATC GTCATGGAAC GTTATCGGTT TGGCCTTGGT
GAATACAAGT ATTTCTCCTA CCCGTTACCA CCAATTATCC ATCGGATTCG CGAGAGTGTG
TATCCGCAGC TGGCGCCGGT GGCTAATCAA TGGATGAATG TGCTGACGAA GACGCAGCCC
TACCCTGCTC GTTTTCAAGA CTTTCAGGAG CTCTGCCGCT CGCATGGGCA AATGCAGCCT
ACTGTCCTCA TTCTGAAATA CGGCCAGGGC GGCCATAATA CCCTGCATCA GGATCTTTAC
GGCGAGTTGT TCTTTCCGAT TCAAATGGTG CTGTTTCTCA ACGACCCGGA GCAGGACTAT
ACCGGCGGAG AGTTCGTAAT GACCGAACAA ATCCCGCGTG CGCAATCCAA AGCCATTGTT
TCGAAACCTC AAAAAGGTGA TGCACTGCTA TTCACGACCA ATTTCAGACC GGTAAAAGGA
AGCAAAGGCT ATTACCGGGT GAATATGAAA CACGGCGTAA GCGAGGTGCA CAAAGGCCGG
CGGTATACAT TAGGCATTAT CTTTCACGAT GCATTGAGCT AG
 
Protein sequence
MINLEDLDWA DVRDNLHRRG YARLTGVLNA EECDDLVSAY DDSTHYRKTI VMERYRFGLG 
EYKYFSYPLP PIIHRIRESV YPQLAPVANQ WMNVLTKTQP YPARFQDFQE LCRSHGQMQP
TVLILKYGQG GHNTLHQDLY GELFFPIQMV LFLNDPEQDY TGGEFVMTEQ IPRAQSKAIV
SKPQKGDALL FTTNFRPVKG SKGYYRVNMK HGVSEVHKGR RYTLGIIFHD ALS