| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_1059 |
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| Symbol | |
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| ID | 8224629 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | - |
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| Start bp | 1255767 |
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| End bp | 1257263 |
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| Gene Length | 1497 bp |
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| Protein Length | 498 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 644928920 |
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| Product | permease YjgP/YjgQ family protein |
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| Protein accession | YP_003085473 |
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| Protein GI | 255034852 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0795] Predicted permeases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.546166 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.553848 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAAGC TGGATAAGCT TATTTTAACG TCCTTTTGGG GACCTTTTGT GATTACAATG
TCGGTCGTGG TGTTCGTCTT TCTGATGCGG ATCATGATCT TTTATATAGA TGACTTCGTG
TCCAAAGACC TGAATGTCAT GGACTATGCA CAGCTATTCT TCTTTTTCAG CCTCATTACC
GTTCCCACGG CACTGCCGCT CGCAATGCTG CTTTCCTCGC TGATGGCATT CGGTAACCTG
GGCGAATTCT TTGAGCTTAC GGCCATCAAA AGTGCTGGTA TTTCGGTGGT GCGGGCCATG
GCGCCGTTGT TCATCGTAGC CGTCGGGATC AGCGTTTTTT CCTTTTATTT CAATGATAGG
GTGTCGCCCT GGGCCAATTT GAAGGGTTAT AGCCTGCTCT ACGATATCAA AACGACCAAG
GCGACGCTGA AAATCAAGGA AGGGATTTTT TATAATGACC TGCCGGGATA TAGTATCAAA
GTGGACGAAA AGCTAGAAAA TGGCAAGATG ACCGGCATGG TGATCTACAA GCACAACAGC
CGGTCGTACG AGTTCGGGAA TACGGAAATC ATCCTCGCCG ACTCGGGCAG AATGTATTCG
ATTAATGAGA ACCGTTACCT GGTGATTGAG CTTTACAACG GTACACGCTA CACGGACGAG
CAGGGCTCGG CAAGTTCGCG GCCCGTTTAC ATTTCGTCGC CCGCCGGCAC CCAAACGCCT
TACTCGAATT TCAACCGGCA GTCGTTCAGG CATTACCGGA TGACGGAAAG CCTCGCTTCT
TTTGGGATGA AACGTACGGA CGAAGGGCAG TTTAAGTACC ACGAGTTCAT GAAGAACATC
AGCGACCTCA CGCACACGGC CGATTCGCTG CGCACTTCAT ACCAGGAAAC GAAGAAAAAC
CTTGTGTCGG GTAGTCAGCA ATATTACTCG TACAACTATC GGGAGGGGAC TGACAAGACG
ATCAAGCCTG GCAAATGGAT CGATTCGCTG GTGACCCGGC CGGTTTCGGA TAGTTTGAAG
AAAGAAATCC TGACGAACAC AAAAGCGGCG TCGAACAGCA TGCTGAGCTA CATCAAGTCG
CAGCAGGATT ACCTGCAAAC GAAGCTGAAA GACGCGAGCA AATACGAGCT CGAAAAGCAT
CACAAATACA CCCAGGCACT TTCCTGCCTG ATCATGTTTC TCATCGGCGC GCCGCTGGGG
GCCATTATCA AGAAAGGAGG CTTCGGCGTG CCGGTGCTGG TTTCGATTTT GTTCTTTATC
CTATTGTATG TTTTGACTAA CCAGGGGGAC AAATGGGTGA AGGAAGGGCT GGTAGCCGTG
CCGGTGGGCG CGTGGATGGC GAATACCATT CTCTTTTTGA CAGGTATGTA TTTCATCGAT
CGCGCACGCA GCGATTCCCG GCTGTTCGAA AAGGACGTGT ATCAGATGTT CTTCAAAAGA
ATTAAGTCGA AATGGGCAAG TAGATTTGGC AAAAGGGAGC TTATCACTCA TAATTAA
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| Protein sequence | MKKLDKLILT SFWGPFVITM SVVVFVFLMR IMIFYIDDFV SKDLNVMDYA QLFFFFSLIT
VPTALPLAML LSSLMAFGNL GEFFELTAIK SAGISVVRAM APLFIVAVGI SVFSFYFNDR
VSPWANLKGY SLLYDIKTTK ATLKIKEGIF YNDLPGYSIK VDEKLENGKM TGMVIYKHNS
RSYEFGNTEI ILADSGRMYS INENRYLVIE LYNGTRYTDE QGSASSRPVY ISSPAGTQTP
YSNFNRQSFR HYRMTESLAS FGMKRTDEGQ FKYHEFMKNI SDLTHTADSL RTSYQETKKN
LVSGSQQYYS YNYREGTDKT IKPGKWIDSL VTRPVSDSLK KEILTNTKAA SNSMLSYIKS
QQDYLQTKLK DASKYELEKH HKYTQALSCL IMFLIGAPLG AIIKKGGFGV PVLVSILFFI
LLYVLTNQGD KWVKEGLVAV PVGAWMANTI LFLTGMYFID RARSDSRLFE KDVYQMFFKR
IKSKWASRFG KRELITHN
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