| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_1058 |
|---|
| Symbol | rpsO |
|---|
| ID | 8224628 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dyadobacter fermentans DSM 18053 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013037 |
|---|
| Strand | - |
|---|
| Start bp | 1255388 |
|---|
| End bp | 1255663 |
|---|
| Gene Length | 276 bp |
|---|
| Protein Length | 91 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 41% |
|---|
| IMG OID | 644928919 |
|---|
| Product | 30S ribosomal protein S15 |
|---|
| Protein accession | YP_003085472 |
|---|
| Protein GI | 255034851 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0184] Ribosomal protein S15P/S13E |
|---|
| TIGRFAM ID | [TIGR00952] ribosomal protein S15, bacterial/organelle |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 0.297598 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 0.435501 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTATTTAA CCGCGGAAAA GAAGAGCGAG ATCTTCGAAT CGAAAGGTTT TAAAAAGGAG
GGCACCGACA CGGGCTCTGC TGAATCACAA ATTGCTTTAT TTACGTACCG TATCAATTAT
CTGAACGAGC ACCTCAAAAC GCACAAGAAA GATAATGATA CACGTCTGGG CCTCCTCAAA
ATGGTAGGAA AGCGCAGAAG ATTGTTGGAT TATCTTTACA AAAAAGACAT CAATCGCTAT
CGTGCGATCA TCGCCGAATT GAACATACGT AAGTAA
|
|---|
| Protein sequence | MYLTAEKKSE IFESKGFKKE GTDTGSAESQ IALFTYRINY LNEHLKTHKK DNDTRLGLLK
MVGKRRRLLD YLYKKDINRY RAIIAELNIR K
|
|---|
| |