| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_1056 |
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| Symbol | |
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| ID | 8224626 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | - |
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| Start bp | 1252207 |
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| End bp | 1253070 |
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| Gene Length | 864 bp |
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| Protein Length | 287 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 644928917 |
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| Product | RNA polymerase, sigma 70 subunit, RpoD subfamily |
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| Protein accession | YP_003085470 |
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| Protein GI | 255034849 |
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| COG category | [K] Transcription |
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| COG ID | [COG0568] DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 0.929536 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.775354 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGACAGC TAAAGATCAG TAAGCAAATT ACCAACCGTG AAAGTCAGTC ATTAGATAAA
TATTTGCAGG AGATCGGTAA GGTGGATTTG CTAACGCCGG ATGAGGAGGT GACGTTAGCT
CAGAAAATCA GGGATGGAGA CCAGCTGGCT TTGGAACGTC TGACCAAGGC GAACCTGCGT
TTCGTGGTGT CTGTTGCCAA GCAATATCAA AATCAAGGCT TGTCGCTGGG TGACCTGATC
AACGAGGGAA ACCTCGGTCT GATCAAGGCA GCACAGCGTT TCGATGAAAC AAGAGGTTTT
AAATTCATTT CTTACGCGGT TTGGTGGATT CGTCAGTCGA TCCTGCAAGC ATTGGCGGAA
CAGTCACGTA TCGTGCGTTT ACCCCTCAAC CGTGTAGGTT CTTTGAATAA AATTTCAAAA
ACTTTCTCCG AACTGGAACA GCGTTTCGAA CGCGAACCAT CGCCGGAAGA GTTGGCGGAA
GTACTGGAAA TTTCTTCTTC CGAAGTAGTG GACACGATGA AGATCTCCGG TCGTCACGTT
TCTATGGACG CGCCATTTGT ACAAGGTGAA GAAAACAGCC TTCTGGACGT TCTGGAAAAT
GACCTGGAAG ATAAGCCGGA TTCCGGCCTT GTGAACGAAT CGCTCCGCAA GGAAGTACAA
CGCGCATTGT GCACGCTTAC CCAACGCGAA GCGGACGTGA TCGCCCTGTA TTTCGGCCTT
AATGGCGAGC ATGCGATGAC TTTGGAGGAG ATTGGGGAGA AGTTTAACCT TACCCGCGAG
CGCGTGCGCC AGATCAAGGA GAAAGCGATC CGCAGATTGC GCCACGTTTC CAGAAGCAAA
GCTTTGAAAA CCTATTTGGG TTAA
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| Protein sequence | MRQLKISKQI TNRESQSLDK YLQEIGKVDL LTPDEEVTLA QKIRDGDQLA LERLTKANLR
FVVSVAKQYQ NQGLSLGDLI NEGNLGLIKA AQRFDETRGF KFISYAVWWI RQSILQALAE
QSRIVRLPLN RVGSLNKISK TFSELEQRFE REPSPEELAE VLEISSSEVV DTMKISGRHV
SMDAPFVQGE ENSLLDVLEN DLEDKPDSGL VNESLRKEVQ RALCTLTQRE ADVIALYFGL
NGEHAMTLEE IGEKFNLTRE RVRQIKEKAI RRLRHVSRSK ALKTYLG
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