| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_1055 |
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| Symbol | |
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| ID | 8224625 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | - |
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| Start bp | 1250426 |
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| End bp | 1252135 |
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| Gene Length | 1710 bp |
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| Protein Length | 569 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 644928916 |
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| Product | 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1- carboxylic acid synthase/2-oxoglutarate decarboxylase |
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| Protein accession | YP_003085469 |
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| Protein GI | 255034848 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG1165] 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase |
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| TIGRFAM ID | [TIGR00173] 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.931622 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTATTT TACAACCTTT GATCGACATG GCCGAGATCT GCTACCGGCA GGGTATCCGG
CATGTGGTGA TATCTCCCGG CTCGCGCAGC GCCGCGCTTA CGCTCGCATT CGCACGTCAC
GGCGGGTTTC AAATGCATGT GTGTATCGAT GAGCGACCGG CAGGCTTCAT CGCCCTCGGA
ATAGCCCAGC AAATCGATGC TCCGGTGGTT TTGATATGCA CGTCGGGCAG TGCGGCCTAT
AACTTCGCTC CGGCCGTTTC TGAGGCGTTT TTTCAGCAAA TTCCGTTGCT CGTGCTGACG
GCGGACCGGC CGAAGGAATG GCAGCATCAG TATGATGGTC AGACGATTTA CCAAACGGCC
ATTTTCGGCC AGCACGTGAA GCGCTCGTTC GAAGTTTCGC CGGACTACGC CCACCCGGAT
GTTCAATGGG CGATCAACCG GATCACCAAT GAGGCGATTA ACCTGGCGTC TATCGCGCCA
AACGGGCCCG TACACATCAA TGTCCCCATT CGCGAGCCGT TTTACCCCGT TGCACAGGAG
GAGCTAGCCG CCTCTGATGA AGTAAGGATT ATCAAACGGC TGGAAAATGC GATCACATGG
CCGCAGCAAG TCTTGGAAGA ATTGCTGGAC GAGTGGGAGA GTGCTCCGCG AATCCTGATT
GCCGGCGGGC AAGGCAGGCC TGATGCAGCG TTGAATGCGG TACTGAACCG CATCAATGAG
GAGTGGCAGA TCCCAGTTCT CGGGGATTGC ATTTCAAACC TTTCGGGTGC TGAAATGATC
CGCCATCACG ATTTGTTTCT GGGCAAATCA GAGACGGAAA AGCTACGGCC CGATTTGCTG
ATTACCTTCG GAATGTCGTT CGTATCAAAG GAATTCAAGC AATTTATTCG AAAAAACCCG
CCCAAATATC ACTGGCATAT TGGACAAGAT GCATTTCTGG CTGATCCGTT TCAATCTGTG
ACTCGCGATA TTCCGGGAAA AGCGGCTGTG TTCTTCGAGA GTTTATTTGA AAAACTTGAT
TATCAATCCT TTGTTGAGAA TGCTGACCTT GGGCATGATA CTTCTTTTTA TGCCCTATGG
CAGGAAAATG ATCGGAATGC GGGGCGAAAG AAGCATGAAA CACTTCGAAA TCTACCATTG
TTAAGTGACT TAACTTTGTT AGATCGTGTG TTTAAATGTT CAGAAAAGAG ATATCAGTTA
CATGTAGCCA ATAGCATGTC TGTACGCTAT GCAAATGTGC TGGCTACGGA AACTGAATGG
GCAGGCGTGT TTGCGAATAG GGGAACGAGC GGGATCGATG GTTGCGTAAG CACGGCCATC
GGGGCGGCAA AAGTGAATGG CCAACCAACT TTGCTGATCG TCGGCGACGT CGCATTTTTG
TATGATCGCA ACGGATTGCT GATCGACCGG CTGCCGCAGA ACCTGAAAAT CGTCGTACTG
AACAATGCGG GAGGAAACAT CTTCCGGATG ATCGACGGGC CGGGCAACTT GCCGGAGTTG
GAAACGTATT TTGAAACAAG GCATTCCTTT TCCGCACGAC GCACGTGTGA AGATTCGGGA
ATTGCATATT TCCATGTTTC CAACCTGGAC ACAGCGGAGC AGACGGTTAA CGAATTTTTG
GCATTCGACG GAATCGCCCT GTTCGAAGGC TTCACTGATC CCGTCGAAAA TACCAGGGCT
TGGAGAGCGC TCAAACGTGC GCTGCACTAG
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| Protein sequence | MAILQPLIDM AEICYRQGIR HVVISPGSRS AALTLAFARH GGFQMHVCID ERPAGFIALG
IAQQIDAPVV LICTSGSAAY NFAPAVSEAF FQQIPLLVLT ADRPKEWQHQ YDGQTIYQTA
IFGQHVKRSF EVSPDYAHPD VQWAINRITN EAINLASIAP NGPVHINVPI REPFYPVAQE
ELAASDEVRI IKRLENAITW PQQVLEELLD EWESAPRILI AGGQGRPDAA LNAVLNRINE
EWQIPVLGDC ISNLSGAEMI RHHDLFLGKS ETEKLRPDLL ITFGMSFVSK EFKQFIRKNP
PKYHWHIGQD AFLADPFQSV TRDIPGKAAV FFESLFEKLD YQSFVENADL GHDTSFYALW
QENDRNAGRK KHETLRNLPL LSDLTLLDRV FKCSEKRYQL HVANSMSVRY ANVLATETEW
AGVFANRGTS GIDGCVSTAI GAAKVNGQPT LLIVGDVAFL YDRNGLLIDR LPQNLKIVVL
NNAGGNIFRM IDGPGNLPEL ETYFETRHSF SARRTCEDSG IAYFHVSNLD TAEQTVNEFL
AFDGIALFEG FTDPVENTRA WRALKRALH
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