Gene Dfer_1047 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_1047 
Symbol 
ID8224617 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp1240093 
End bp1240752 
Gene Length660 bp 
Protein Length219 aa 
Translation table11 
GC content48% 
IMG OID644928908 
ProducttRNA (guanine-N(7)-)-methyltransferase 
Protein accessionYP_003085461 
Protein GI255034840 
COG category[R] General function prediction only 
COG ID[COG0220] Predicted S-adenosylmethionine-dependent methyltransferase 
TIGRFAM ID[TIGR00091] tRNA (guanine-N(7)-)-methyltransferase 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value0.715174 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.315052 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGCAGAA AAAAGTTAGC GTTTTACAGG TTTAGTGAAG AAGCAGACAA TGTAGTGCAG 
GCGGGCAAAC CGCTTTATTC GGAAATCAAA GGCAATTGGA ATAAACTTTA CTTTAACAAC
GAGAACCCGA TCGTCGTGGA ATTAGCCTGC GGCAAGGGGG AATACACGAT CGGTCTAGGC
GCGAAGTTCC CTGATAAGAA CTTCATTGGC GTGGACATCA AAGGCGACCG CATTGCGCGG
GGGAGTGCCA TGGCCAGCGA GCAGAATTTA ACGAACGTCG CATTTCTGCG GGCAGGCATC
CAGTTTTCCG AGGAGTTTTT TGGCCAGGGC GAGCTAAGCG AAATCTGGCT CGTTCATCCG
GACCCGCAGG TTCGCAACCG CTATGAGAAA TATCGCCTCA CAAATCCCAC GTTTTTGAGC
AGGTATGCCA ATTTTTTGAA GCCGGGAGGG ATGTTTTTCG TGAAAACAGA TAACACGTTT
TTTTACGAAT ACAGTTTGCA GACGTTGAGC GAGGACCCGA AATTCAGGAT ACTCGAACAT
ACCGACGACT TGTATCACTC GCATTTGTTA GATGAGCATC ACGGCGTGCG TACACATTAC
GAAGCAATTT TCACAGCGAA GGGTTACACG ATCAAATACA TTAAAGCGCA GCTGGTTTAG
 
Protein sequence
MGRKKLAFYR FSEEADNVVQ AGKPLYSEIK GNWNKLYFNN ENPIVVELAC GKGEYTIGLG 
AKFPDKNFIG VDIKGDRIAR GSAMASEQNL TNVAFLRAGI QFSEEFFGQG ELSEIWLVHP
DPQVRNRYEK YRLTNPTFLS RYANFLKPGG MFFVKTDNTF FYEYSLQTLS EDPKFRILEH
TDDLYHSHLL DEHHGVRTHY EAIFTAKGYT IKYIKAQLV