Gene Dfer_1046 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_1046 
Symbol 
ID8224616 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand+ 
Start bp1239009 
End bp1240022 
Gene Length1014 bp 
Protein Length337 aa 
Translation table11 
GC content48% 
IMG OID644928907 
Productglyceraldehyde-3-phosphate dehydrogenase, type I 
Protein accessionYP_003085460 
Protein GI255034839 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0057] Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase 
TIGRFAM ID[TIGR01534] glyceraldehyde-3-phosphate dehydrogenase, type I 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.121764 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.338137 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCAAAAG TAAAAGTCGC AATCAACGGA TTTGGCCGCA TCGGCCGCCT TGTTTACCGT 
CAAATCTACA ACATGGAGGG CATCGACATC GTAGCCATCA ATGATTTGAC CAGTCCAAAA 
GTATTAGCAC ATCTCCTCAA ATACGATACC GCGCAAGGAC GTTTCGACGC TGACGTTAAG 
CCTACCGATA ACTCAATCGT TGTAAACGGC GAGAATATCG TTATCTATGC ACAACGCGAT 
CCTTCACAAA TTCCCTGGGC ACAACATGAT GTAGACGTTG TACTGGAATG TACCGGTTTC 
TTCACCAGTG CAGAATCAGC AAGCGCGCAC ATCACTGCGG GTGCTAAGAA AGTTGTAATC 
TCCGCTCCTG CAACTGGCGA TTTGAAAACC ATCGTTTTCA ACGTAAACCA CAATATCCTG 
GACGGATCTG AAACCATTAT CAGCGGCGCT TCTTGTACAA CCAACTGCCT TGCCCCAATG 
GCACAGGTGC TGGAAGAGCA ATTCGGCATC GTAAATGGTT TGATGACCAC CATCCACGCT 
TACACTAACG ACCAGAACAC CCAGGATGCG CCACATCCAA AAGGTGACCT GAGAAGAGCG 
CGAGCTGCTG CTCAAAACAT CGTGCCAAAC AGTACAGGTG CTGCAAAAGC GATCGGTCTC 
GTGTTGCCAT CATTGAAAGG CAAACTCGAC GGATCAGCTC AACGCGTTCC TACGCTCACT 
GGCTCATTGA CTGAATTGAC GGCTGTTTTG GGTCGCGAAA CTACTGTGGA AGAAATTAAC 
GCCGCTATGA AAGCTGCCGC TAACGAAAGC TACGGTTACA CAGAAGACGA AATCGTGAGC 
AGCGATATCA TCGGTATCAG CTACGGCTCG CTGTTCGATG CTACGCAGAC ACGCGTTCAG 
AAAGTAGGTG ACGTTCAGTT GGTTAGAACT GTTTCCTGGT ACGACAACGA AATGTCTTAC 
GTATCCCAAT TGGTAAGAAC AGTTTATTAC TTCGCGAGCC TGATCAAGAA GTAA
 
Protein sequence
MSKVKVAING FGRIGRLVYR QIYNMEGIDI VAINDLTSPK VLAHLLKYDT AQGRFDADVK 
PTDNSIVVNG ENIVIYAQRD PSQIPWAQHD VDVVLECTGF FTSAESASAH ITAGAKKVVI 
SAPATGDLKT IVFNVNHNIL DGSETIISGA SCTTNCLAPM AQVLEEQFGI VNGLMTTIHA 
YTNDQNTQDA PHPKGDLRRA RAAAQNIVPN STGAAKAIGL VLPSLKGKLD GSAQRVPTLT 
GSLTELTAVL GRETTVEEIN AAMKAAANES YGYTEDEIVS SDIIGISYGS LFDATQTRVQ 
KVGDVQLVRT VSWYDNEMSY VSQLVRTVYY FASLIKK