Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dfer_1029 |
Symbol | |
ID | 8224599 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dyadobacter fermentans DSM 18053 |
Kingdom | Bacteria |
Replicon accession | NC_013037 |
Strand | + |
Start bp | 1208554 |
End bp | 1211181 |
Gene Length | 2628 bp |
Protein Length | 875 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 644928890 |
Product | DNA gyrase, A subunit |
Protein accession | YP_003085443 |
Protein GI | 255034822 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0188] Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit |
TIGRFAM ID | [TIGR01063] DNA gyrase, A subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.20578 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCAGAAT CTTCTGGTGA AAACATTATC CCGATTAATA TCGAGGATGA AATGCGTGGA GCCTACATCG ACTATTCGAT GTCCGTTATC ATCTCCCGCG CTTTGCCCGA CGTTCGCGAT GGTCTGAAAC CCGTTCACAG ACGGGTCCTT TATGGAATGG ACGATCTGGG CGTGAGTTAC AACCGAGCCC ATAAGAAATC AGCGCGTATC GTAGGGGAAG TGCTTGGGAA GTACCACCCC CACGGCGACT CGTCCGTGTA CAACACGATG GTGCGTATGG CCCAGCCGTG GTCGCTGCGC TACCCGCTTG TCGACGGCCA GGGTAACTTC GGGTCGGTCG ATGGGGACAA TCCGGCGGCG ATGCGTTATA CGGAGGCAAG GCTGAAAAGA ATTGCCGATG AGCTGTTGGC CGATCTTAAC AAGGATACGG TTGATTTTCA ACCCAACTTT GACGACTCGC TGAGCGAGCC TTCGGTACTT CCGGCAAAAT TCCCCAACCT GCTCGTGAAC GGTTCGTCCG GTATCGCGGT AGGGATGGCC ACCAACATGG CGCCGCACAA CCTCGGAGAG GTCGTAGACG GCGTGCTCGC TTACATTGAC AACAACGAAA TCACCATTCC GGAACTGATG GAGCACGTAA AAGCTCCCGA TTTCCCGACG GGTGGTATCA TTTACGGTTA CAATGGCGTA CGCTCGGCGA TGGAAACCGG CCGCGGAAGC ATTATTATGC GTTCGAAGGC GCAATTCGAA GTTTCCAAGA CCGGCCGCGA GCAGATCATC GTCACCGAAA TCCCTTACAT GATCAATAAG GCGGCAATGA TCGAACGGAT CGCGTCGCTG ATCAATGACA AGAAACTGGA AGGAATTTCC GACATCCGCG ACGAGTCTGA CCGCGAAGGT ATGCGCATTG TTTTCGACCT GAAAAAAGAT GCGATCCCTA ATATTGTATT GAACCACCTG TTCAAATACA CGCCGCTGCA AACGTCGTTC GGGGTGAACA ACGTGGCGCT CGTGAAAGGC CGCCCGGTGT TGCTCAACCT GAAAGATTTG ATCAAGCATT ATGTGGACCA CCGGATTGTG GTAATTACCC GCCGGACGGA ATACGAATTG CGCGAAGCAG AAAAACGCGC GCACATTCTG CAAGGCTTGC TGATCGCACT GGATAACCTC GATGCGGTGA TCGCATTGAT CCGCGCAGCC CGCGATCCTG AAACGGCTAA GACCGGTTTG ATGGAGCAAT TCGAACTGTC GGAAATCCAG GCGCGCGCGA TCCTTGATAT GCGCTTGCAA CGTTTGACAG GTCTGGAAAG AGAGAAGATC GTGAAGGAAT ATGAAGAGAT CATGATCCTG ATCGCCGACT TGAAAGACAT TCTGGCCAAC GAATACCGCA AATACGAGAT CATTAAAACC GAGCTGACCG ACATTAAGGA GCGCTACGGG GATGCGCGCA GAACGCAGAT CGAATTCTCG GCAGAGGAAT TCAGCGACGA AGACATGATT GCCGACGAGG AAATGCTCAT TACTATTTCC AAAGAAGGGT ATATCAAACG TACGCCGCTT TCGGAATACC GCACGCAAAC AAGGGGAGGA GTTGGCTCCC GCGGTGTGAA AACGAAGGAT ACGGATTTCA CCGAGCACCT GTTCTCCGCG ACAATGCTCA ACTACCTGCT GATCTTCACC GAATACGGTA AGTTGTTTTG GATGAAGGTG TACGAGGTGC CGGAAGGAAG CAAAACTTCG AAAGGCCGCC CGATCCAGAA CCTGATCAGC CTCGAAAGCG GCGATTCGAT CCGTTCGGTG ATCAACGTGA AGACCTTGTC GGATGAGGAT TATATCAACA ATAATTACCT CATTATGTGT ACCGAGCAGG GCACGATCAA GAAGACCTTG CTCGAAGCTT ACTCACGTCC GCGTACAAAT GGTATCATCG CCATTTCGAT CAACGAAGGC GACCGCTTGC TGAACGTGGC GTTAACCAAC GGTGATAACG ACATCGTGAT CGCGTCGGCA GCCGGTAGGG CGGTCCGCTT TAACGAAAAA GGCGTGCGTC CGATGGGCCG TACAGCGGCC GGTGTGCGTG GTATTAACCT GAACGATCCT GATAATAAGG TTATCGGCAT GGTTTGTATC AGCCGTGAAG ATGCACAGTT GCTCGTGGTG TCTGAAAATG GATTTGGAAA GCGCTCTGCG ATAGATAGTT ACCGTGTCAC CAACCGTGGT GGCAAAGGAG TCTCCACGAT GAATGCGACT GATAAGGTCG GTAAGCTGGT GGCCATTCGC GAGGTAACCG AAGAGGACGA CCTGATGATC ATCACCCGCA ATGGTATCGC GATCAGAATG AGCGTACTCG ACATCCGCCA GGCCGGCCGT AACACACAGG GTGTGAAGCT GATCCGCCTG AGCAGCTCCG ACGAAATCAC TTCGGTGACC CGCATTCTGA AAGATCCGGA CGAAAAAGCC GAAGAACTGG ACGAAGATGG CAACGTAGTA GCTAAACCGG TAGCGCAGGT TGAAGGTGCT TCGGCCGATG ATGTAATTGT TTCTGATGAT GAGTTGGACG AGGAAGAAGA TGTCGCTGAC GACGACGAGG AGGAGGATGA AGAGCCTTCC GACGACGCAG AGGCATGA
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Protein sequence | MAESSGENII PINIEDEMRG AYIDYSMSVI ISRALPDVRD GLKPVHRRVL YGMDDLGVSY NRAHKKSARI VGEVLGKYHP HGDSSVYNTM VRMAQPWSLR YPLVDGQGNF GSVDGDNPAA MRYTEARLKR IADELLADLN KDTVDFQPNF DDSLSEPSVL PAKFPNLLVN GSSGIAVGMA TNMAPHNLGE VVDGVLAYID NNEITIPELM EHVKAPDFPT GGIIYGYNGV RSAMETGRGS IIMRSKAQFE VSKTGREQII VTEIPYMINK AAMIERIASL INDKKLEGIS DIRDESDREG MRIVFDLKKD AIPNIVLNHL FKYTPLQTSF GVNNVALVKG RPVLLNLKDL IKHYVDHRIV VITRRTEYEL REAEKRAHIL QGLLIALDNL DAVIALIRAA RDPETAKTGL MEQFELSEIQ ARAILDMRLQ RLTGLEREKI VKEYEEIMIL IADLKDILAN EYRKYEIIKT ELTDIKERYG DARRTQIEFS AEEFSDEDMI ADEEMLITIS KEGYIKRTPL SEYRTQTRGG VGSRGVKTKD TDFTEHLFSA TMLNYLLIFT EYGKLFWMKV YEVPEGSKTS KGRPIQNLIS LESGDSIRSV INVKTLSDED YINNNYLIMC TEQGTIKKTL LEAYSRPRTN GIIAISINEG DRLLNVALTN GDNDIVIASA AGRAVRFNEK GVRPMGRTAA GVRGINLNDP DNKVIGMVCI SREDAQLLVV SENGFGKRSA IDSYRVTNRG GKGVSTMNAT DKVGKLVAIR EVTEEDDLMI ITRNGIAIRM SVLDIRQAGR NTQGVKLIRL SSSDEITSVT RILKDPDEKA EELDEDGNVV AKPVAQVEGA SADDVIVSDD ELDEEEDVAD DDEEEDEEPS DDAEA
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