| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_1028 |
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| Symbol | |
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| ID | 8224598 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | - |
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| Start bp | 1206966 |
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| End bp | 1208270 |
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| Gene Length | 1305 bp |
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| Protein Length | 434 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 644928889 |
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| Product | gluconate transporter |
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| Protein accession | YP_003085442 |
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| Protein GI | 255034821 |
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| COG category | [E] Amino acid transport and metabolism
[G] Carbohydrate transport and metabolism |
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| COG ID | [COG2610] H+/gluconate symporter and related permeases |
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| TIGRFAM ID | [TIGR00791] gluconate transporter |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.238544 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.150207 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCTTTAC TATTAACCTT TATTGCGATC CTCGCCCTCA TTTTACTCAT TGCCTGGCTC
AAAATCGACA CATTCATTTC CTTTCTGCTC GTATCCATCG CCCTCGGCCT GGCGAGTGGG
CTGGATGTGG ACACGGTGAG CAAGGCCATT CAAAAGGGTG TAGGAGGGAC GCTCGGCGAC
CTGGTACTGA TCGTCGGGTT CGGGGCGATG CTAGGGAAGA TGGTGGCGGA CAGTGGGGCG
GCCCAACGCA TTACCGATGC GCTGATCAGC CTTTTCGGTC GAAAATATAT CCAGTGGGGT
ATGGCACTGG CCGGTTTCGT GATAGGGATA CCGTTGTTCT ATAATGCTGG TTTCGTGATT
GTTATTCCAT TGATTTTCAT GATCAGTGCA ACCGCCCGGT TACCATTATT ATATATTGGT
ATTCCAATGT TATCTGCTTT GTCGGTAGCG CATGGTTACC TCCCACCCCA CCCTTCCCCG
GCGGCGATCG CCAGCCAGCT CAACGCCGAC CTGGGCAAGA CCCTATTGTA TGGAATGATC
GTTTCGCTGC CTGCCATTGC CGTGGCCGGC CCTATTTTCG GAAAAACGCT GAAACGCTTC
CAACCCAAGC CCGACGAAGA CCTTTTCGAT GTAAAACCCC GCCCCGCTTC CGAACTTCCG
GGATTGGGCA TTAGCGTTAT CACCGCCCTG CTCCCGGTGT TCCTGCTTAC TACCATGTCG
GGTGTAAAAC GCATTTATCC CGACAATAAA CTGATCGCCT TGCTGGCCGA GCCCTATTTC
GGGATGCTCG TTTCGGTCCT TTTCGCCGCT TATGCACTGG GCGTGAGACG CGGGATGAAT
ATGAAAAAGG TGGGTAAATC GATGGAAGAA GCATTCAAAG GCGTATCCAC GATCCTGCTG
ATCATTGCAG GAGCCGGCGT TTTCAAAGAA ATCATGACAG CCAGCGGCGT AAGCACCTTC
ATCGCCGAAA GTCTCAAAGG AATGGACATC TCCCCGCTCC TGCTCAGCTG GGCTATTGCG
GCGGTAATCC GCGTTTGTGT GGGTTCCGCC ACCGTCGCGG GGCTCACCAC CGTAGGTATT
CTCGCGCCCT TGCTCGCTAA TGCGGGCGTA CCTGCGGAGC TGCTCGTACT CGCCATCGGC
TCAGGCAGTT TGATGTTCTC CCACCTCAAC GACGGCGGTT TCTGGCTCTT CAAAGAATAC
TTCAATCTCA GCATTAAAGA CACCATCCTT ACCTGGTCGG TAATGGAAAC AATTGTGTCA
GTAATGGGTT TGCTGGGCGT TTTAGTGCTA AATTTGTTCG TGTAA
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| Protein sequence | MPLLLTFIAI LALILLIAWL KIDTFISFLL VSIALGLASG LDVDTVSKAI QKGVGGTLGD
LVLIVGFGAM LGKMVADSGA AQRITDALIS LFGRKYIQWG MALAGFVIGI PLFYNAGFVI
VIPLIFMISA TARLPLLYIG IPMLSALSVA HGYLPPHPSP AAIASQLNAD LGKTLLYGMI
VSLPAIAVAG PIFGKTLKRF QPKPDEDLFD VKPRPASELP GLGISVITAL LPVFLLTTMS
GVKRIYPDNK LIALLAEPYF GMLVSVLFAA YALGVRRGMN MKKVGKSMEE AFKGVSTILL
IIAGAGVFKE IMTASGVSTF IAESLKGMDI SPLLLSWAIA AVIRVCVGSA TVAGLTTVGI
LAPLLANAGV PAELLVLAIG SGSLMFSHLN DGGFWLFKEY FNLSIKDTIL TWSVMETIVS
VMGLLGVLVL NLFV
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