Gene Dfer_1025 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_1025 
Symbol 
ID8224595 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp1203935 
End bp1205005 
Gene Length1071 bp 
Protein Length356 aa 
Translation table11 
GC content59% 
IMG OID644928886 
Productpeptidase M19 renal dipeptidase 
Protein accessionYP_003085439 
Protein GI255034818 
COG category[E] Amino acid transport and metabolism 
COG ID[COG2355] Zn-dependent dipeptidase, microsomal dipeptidase homolog 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.134164 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.69522 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCCTCT TCGACGCTCA CCTTGACCTT TCCATGAATG CCGTGGAATG GAACCGGGAC 
CTGACACAAG ATTTGTATTC GATCCGCGAA CGGGAGAAGC ACCTCACCGA CAAGCCCGAC
CGCGGCAAAG GGGTTGTGAG CTTTCCTGAA ATGCGGAAAG GTAATATCGG CCTTTGCGTC
GCCACGCAGA TCGGCCGTTA CATTAAGCCC GACAGCAAAA TCCCCGGCTG GCACTCGCAG
GCGCAGGCGT GGGCGATCAC GCAGGCGCAG GTGGCCTGGT ACAAAGCCAT GGAAGAAGCC
GGCGAAATGG TGCAGATCAC CGGATTGGCC GGCCTTCGTG AACACCTCCA TTTGTGGCAA
AATGCCGAAA GCACCGAAGG ATTGCCCATT GGCTACATTC TAAGCCTGGA AGGCGCCGAC
TCGTTTGTGA GCCTCAGAAA CCTGGAAACC GCGTACGGCT ACGGCTTGCG GGCGATCGGA
CCGGCGCATT ACGGACCGGG CGTGTACGCA TACGGGACTG ATTCGGACGC GCCGCTCACC
GGCACAGGCA AAGATCTGCT CCGCGAAATG GACCAGCTCG ACATGATCCT GGATGCTACC
CACTTGTGCG ACACAGCATT TTGGGAAGCC ATGGACCTGT ACCGCGGGCC GGTTTGGGCG
AGCCATAACC TCGTTCGCGC CGTGACGCCG CATAACCGCC AGTTTTCCGA CGATATGGTG
AAAGTCCTGC TCGACCGGGG CGCCGTGATC GGGATGGCGT TCGATGCCTG GATGATGATA
CCCGGCTGGG TCCGCGGAAA ATCGACGCCG GAGAATACGG GGCTGAAAAT CGAGCACATT
GTGCAGCACA TCGATCACAT TTGCCAGATC GCCGGCAATG CGCAGCACGT CGGCATTGGT
TCCGACCTCG ATGGCGCATA TGGTAAGGAA CAGTCGCCCG GCGATCTCGA CTCGATTGCC
GATTTGCAGA CCATCCCTGC CCTACTCGCC CAGCGCGGCT ATTCCGAAAG CGATATCGAG
CGCATCATGT GGCGCAACTG GGTCGATTTT CTGGAAAAGA ACTGGGCCTG A
 
Protein sequence
MFLFDAHLDL SMNAVEWNRD LTQDLYSIRE REKHLTDKPD RGKGVVSFPE MRKGNIGLCV 
ATQIGRYIKP DSKIPGWHSQ AQAWAITQAQ VAWYKAMEEA GEMVQITGLA GLREHLHLWQ
NAESTEGLPI GYILSLEGAD SFVSLRNLET AYGYGLRAIG PAHYGPGVYA YGTDSDAPLT
GTGKDLLREM DQLDMILDAT HLCDTAFWEA MDLYRGPVWA SHNLVRAVTP HNRQFSDDMV
KVLLDRGAVI GMAFDAWMMI PGWVRGKSTP ENTGLKIEHI VQHIDHICQI AGNAQHVGIG
SDLDGAYGKE QSPGDLDSIA DLQTIPALLA QRGYSESDIE RIMWRNWVDF LEKNWA